PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 225aa MW: 25986.4 Da PI: 7.0447 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.8 | 2.1e-19 | 61 | 115 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+ ++t++ql+ Le+ F+++ +++ +++ +L+k+lgL+ rq+ vWFqNrRa++k+ XP_023885965.1 61 KKKRLTSDQLDSLERSFQEEIKLDPDRKIKLSKELGLQPRQIAVWFQNRRARWKN 115 56779************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 118.2 | 4.5e-38 | 60 | 151 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+++q+ +LE+sF+ee kL+p+rK +l++eLglqprq+avWFqnrRAR+k+kqlE+ y++Lk++yda+++e+ +L++ev +L++ l+ XP_023885965.1 60 EKKKRLTSDQLDSLERSFQEEIKLDPDRKIKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDVLKQEYDAISREKLKLQEEVMKLKAMLQ 151 69**************************************************************************************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MDWTGSLRPF VPRPEPSLNF LYNYNCDPYQ GMEVKHPGMV DLGHEMLPAM EKNNFGSCQE 60 KKKRLTSDQL DSLERSFQEE IKLDPDRKIK LSKELGLQPR QIAVWFQNRR ARWKNKQLEH 120 LYDVLKQEYD AISREKLKLQ EEVMKLKAML QREQAARKPV STGYTEITGE ETVESTSVAI 180 NGCNNKPQGT GHHQIADYNF LFSVDEYNPV ASSPAYWAGL PSYPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 90 | KKKRLTSDQLDSLERSFQEEIKLDPDRKIK |
2 | 109 | 117 | RRARWKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 5e-59 | HD-ZIP family protein |