PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 290aa MW: 32330.1 Da PI: 9.7277 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.8 | 1.2e-13 | 106 | 150 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT+eE++l++ + ++lG g+Wk I+r + ++R++ q+ s+ qk+ XP_023885695.1 106 RWTEEEHKLFLIGLEKLGRGDWKGISRDFVTTRSPAQVASHAQKH 150 9******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MVRGSMIVRR CSQCRLSGHN FTTCSKKNNN NITTTIASGN NNSNNASTTI ANYNNNNAGL 60 IKIFGVYFQK SVDDHDLNLG VSMENRSSKS VEREVDIDTE RKKGRRWTEE EHKLFLIGLE 120 KLGRGDWKGI SRDFVTTRSP AQVASHAQKH YMRQVAIDDK KKNRPSVFDL SLNEDELAPK 180 DSSVSHTEKS GIEKALKASN SQALALVNNN ENPLEATTAY QHNVNQSPHV ALDIPPIAQM 240 PPPVFGAPNY CWSPSTVNSA RQSYSSWLPG TLKNSVFHRH RNSSHIVVLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 1e-30 | MYB_related family protein |