PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 820aa MW: 89424 Da PI: 6.2525 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.9 | 5.6e-21 | 119 | 174 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k +++t++q++eLe +F+++++p++++r eL++klgL+ +qVk+WFqNrR+++k XP_023885611.1 119 KKKYHRHTPNQIQELEGFFKECPHPDEKQRLELSRKLGLEIKQVKFWFQNRRTQMK 174 79999************************************************999 PP | |||||||
2 | START | 183.2 | 1.4e-57 | 328 | 550 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 la++a++el+k+a+ ++ +W ks e +n++e+++ f++ + + +e+ r++g+v+m++ lve+l+d + +W+e+++ +a+t++ XP_023885611.1 328 LALTAMDELIKMAQPDSSLWIKSLdgrkETLNQEEYVRAFSPCIGtkpvgFVTETTRDTGMVIMNSLALVETLMDEG-RWKEMFPciiaRASTID 421 6899*************************************998899******************************.***************** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171 is+g galq+m aelq+lsp v+ R f+Ry++q+ +g+w++vdvS+d + ++ +++v +++lpSg+++++++ng+skvtw+eh + XP_023885611.1 422 LISNGiagtknGALQVMHAELQVLSPFVSvRQLKFLRYCKQQAEGVWAVVDVSIDISIESTNMHPFVNCRRLPSGCVVQDMPNGYSKVTWIEHSE 516 ********************************************************999999********************************* PP --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 172 lkgrlphwllrslvksglaegaktwvatlqrqce 205 ++++ +h+l++++++ g+ +ga++wvatlqrq e XP_023885611.1 517 YNESGIHELYQPFIRAGMGFGAQRWVATLQRQSE 550 *******************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 820 aa Download sequence |
MMGFKGLISG GSGGGGAARV VADIAPHSSN MTSGAFAPLP FLSTQPIPSS MHSSSTLTLS 60 TSRKMEGQGG EMALMGENYD PGMVGRLRED GYESRSGSDN VEGSGDDQEA GNDQGPAKKK 120 KYHRHTPNQI QELEGFFKEC PHPDEKQRLE LSRKLGLEIK QVKFWFQNRR TQMKTQLERH 180 ENVILRQEND KLRAENTLMR DAMANPVCSN CGGPAIPGQI SFEEHQLRIE NARLKDELNR 240 ICALANKFLG RPLSSLATSI PLPSSTSGLE LGVGRNGIGA LSSMGAPLPM GLDLGDGIMG 300 ASAMPLIKPP MSFRGNEIPM DGSMFMDLAL TAMDELIKMA QPDSSLWIKS LDGRKETLNQ 360 EEYVRAFSPC IGTKPVGFVT ETTRDTGMVI MNSLALVETL MDEGRWKEMF PCIIARASTI 420 DLISNGIAGT KNGALQVMHA ELQVLSPFVS VRQLKFLRYC KQQAEGVWAV VDVSIDISIE 480 STNMHPFVNC RRLPSGCVVQ DMPNGYSKVT WIEHSEYNES GIHELYQPFI RAGMGFGAQR 540 WVATLQRQSE FLAILMSSTF PLEDHTTLSP AGKRSMLKLA QRMTDKFCSG VCASTTHKWD 600 NLRLGNVGEN VRVMTRRNLD DPGEPHGIVV SAATSVWMPV SQQGLFDFLR DDRSRSQWDI 660 LCVGRPIQEM IHIAKGQKQG NCVSLLRGNS TNESESNMLI LQETWTDASG SVVVYAPVDA 720 PSINVVMSGG DSTYVALLPS GFSILPDDQS FFGGPQNCNG TVIKEDNNGC DGSGGCLLTV 780 GFQILINSQP AAKLTVESVE TVNNLISCTI QKIKAALKIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |