PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885588.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 366aa MW: 41984.8 Da PI: 7.1611

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.5e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ evi+evd++k+ePw+L++++k ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_023885588.1 8 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-EVIREVDLNKMEPWELQERCKIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 101 69**************************.99**********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_023885588.1 102 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MASSSGGVPP GFRFHPTDEE LLHYYLKKKV SFQKFDMEVI REVDLNKMEP WELQERCKIG 60 STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSYKKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDGD DPQENCNEDG WVVCRVFKKK NLFKVGNEGG SIINSDRQLN 180 INTLSTNQPR TFMHRDNQYV STRQQHNNGN QPSFEPELAL HYTHIPAAAS SQYSLFQSQP 240 LIPSLKPLGG GYDYSTIPSD TPVMVKQLMS NPRDCESGSE SLRYQTCEPG LEVGTCEPTH 300 QQIVTAGRDD HEGINEWTML DRLVTSHLGN EESSKEVRFE DANASSTHQI NQLSLRGEMD 360 LWGYGK

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MASSSGGVPP GFRFHPTDEE LLHYYLKKKV SFQKFDMEVI REVDLNKMEP WELQERCKIG  60
STPQNEWYFF SHKDRKYPTG SRTNRATNAG FWKATGRDKC IRNSYKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDGD DPQENCNEDG WVVCRVFKKK NLFKVGNEGG SIINSDRQLN  180
INTLSTNQPR TFMHRDNQYV STRQQHNNGN QPSFEPELAL HYTHIPAAAS SQYSLFQSQP  240
LIPSLKPLGG GYDYSTIPSD TPVMVKQLMS NPRDCESGSE SLRYQTCEPG LEVGTCEPTH  300
QQIVTAGRDD HEGINEWTML DRLVTSHLGN EESSKEVRFE DANASSTHQI NQLSLRGEMD  360
LWGYGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-159	NAC family protein