PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885198.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 208aa    MW: 23833 Da    PI: 8.081
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1865.6e-2743132190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY eYA++vGF vr+ + ++s  +g++  r++ C+k+g++ +++ +   e+++r++ r gCka++ vk+ek+gkw+v+++e+eHnH+l+
  XP_023885198.1  43 KFYVEYARRVGFIVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHRGTIGPEKKPRPSAREGCKATILVKMEKSGKWVVSRFEKEHNHPLV 132
                     6*********************************************99****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MDLEKEVEVI NSSLEVNTGS FEEGAVLEPY VGMEFDSEDA ARKFYVEYAR RVGFIVRIMQ  60
RRRSGIDGRT LARRLGCNKQ GFSPNHRGTI GPEKKPRPSA REGCKATILV KMEKSGKWVV  120
SRFEKEHNHP LVVTANGFST SGDKDKKIEE LTMELERQEQ LCAAYREKLL SFMNNVEDET  180
EELSSKIQVI VDNVRKVESE VQKHSRHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.11e-75FAR1 family protein