PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023885153.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 352aa    MW: 38644.7 Da    PI: 4.3967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023885153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-19121170154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s+y+GVr++k +g+W+AeIrd +     + +r++lg++ t+eeA +a+++ r+++e
  XP_023885153.1 121 SKYRGVRQRK-WGKWAAEIRDpF-----KgARIWLGTYNTPEEASEAYERKRLQFE 170
                     89*******9.**********55.....45**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MPEPRKQPAK SKKSTATIPS GESSITMMRK VRVICSDPYA TDSSSSEDEC EDRRAKKCKK  60
FIREINLPLV LKQQSKPSSL ESESSCQDSN NNNGTKTPNI VEARQKKRVL AKTPSRRPSS  120
SKYRGVRQRK WGKWAAEIRD PFKGARIWLG TYNTPEEASE AYERKRLQFE AAMAMSSATP  180
AVTASASSGK SNNASASSAV VSPSQNNPQP VSSEDSEGVL SHTSPASVLE LETSASNTKG  240
NATDLITDEC VEVTNAEISL AELQIPDDLG LMDETFADVP FEQELNFEPE SEFDPLCFDN  300
IGQFFDGYSG LEDIEICGFD NDGPSELPDW DFADIGNDIA SWMDEPLNIP CQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-30ERF family protein