PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023885112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 113aa MW: 12864.6 Da PI: 5.9929 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.8 | 2.2e-12 | 45 | 86 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 teEd+l+ ++v++ G++ W I++ + gR +kqc++rw+++l XP_023885112.1 45 TEEDDLICELVAKQGKKKWCEISKSLL-GRIGKQCRERWHNHL 86 8*************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 21.5 | 5.5e-07 | 93 | 113 | 2 | 22 |
SSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg 22 +WT+eE+ +l++a++++G++ XP_023885112.1 93 TAWTKEEESILINAHQMYGNK 113 68*****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MMSSNPGLVT YGSSDEFFES SVAEVEAHNW ILEPSASVLC HECATEEDDL ICELVAKQGK 60 KKWCEISKSL LGRIGKQCRE RWHNHLNPNI KKTAWTKEEE SILINAHQMY GNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 6e-31 | MYB family protein |