PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885111.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 116aa MW: 13180 Da PI: 5.9929

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.7	2.3e-12	48	89	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 teEd+l+ ++v++ G++ W I++ + gR +kqc++rw+++l XP_023885111.1 48 TEEDDLICELVAKQGKKKWCEISKSLL-GRIGKQCRERWHNHL 89 8***********************9.***********97 PP
2	Myb_DNA-binding	21.4	5.7e-07	96	116	2	22
SSS-HHHHHHHHHHHHHTTTT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg 22 +WT+eE+ +l++a++++G++ XP_023885111.1 96 TAWTKEEESILINAHQMYGNK 116 68*****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
MAIMMSSNPG LVTYGSSDEF FESSVAEVEA HNWILEPSAS VLCHECATEE DDLICELVAK 60 QGKKKWCEIS KSLLGRIGKQ CRERWHNHLN PNIKKTAWTK EEESILINAH QMYGNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	6e-31	MYB family protein