PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023885011.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 265aa MW: 30735.1 Da PI: 5.235

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023885011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.5	2.7e-49	10	138	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +p+GfrFhPtdeelv++yL+ k+eg++ ++ +vi+ev+++k+eP+dLpk +k++++ew+fFs+rd k+++++r+nratksgyWk tgkd++++ XP_023885011.1 10 MPVGFRFHPTDEELVSHYLRLKMEGNDSQV-HVIPEVNVCKWEPSDLPKfsVIKSDDQEWFFFSPRDFKSSNSNRTNRATKSGYWKVTGKDRKIK 103 699**********************999.99***********5458889999*********************************** PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +k +++++g+kktLvf++gr ++g+kt+Wvmhey+ XP_023885011.1 104 AKgTDNVIGTKKTLVFHRGRVRDGVKTSWVMHEYQ 138 977788**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MTSIKGMESM PVGFRFHPTD EELVSHYLRL KMEGNDSQVH VIPEVNVCKW EPSDLPKFSV 60 IKSDDQEWFF FSPRDFKSSN SNRTNRATKS GYWKVTGKDR KIKAKGTDNV IGTKKTLVFH 120 RGRVRDGVKT SWVMHEYQPT VTLPHQRAFV LCRLKKKMDE KTEVATCDEG EESSYIASDF 180 ENPMPEETNP EVYDHTEEDL ESVLQLLQQP QNYDASSSQL PLYNQQEPSF MDSTFTNGHN 240 EVQFQSDHNE HEEDQTKFVH SLFVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	2e-69	NAC family protein