PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884782.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 429aa MW: 47613.2 Da PI: 6.3955

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	242	296	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+F++av++LGG+e+AtPk+il+lm+v+gL ++h+kSHLQkYRl XP_023884782.1 242 KARIRWTSELHEHFLDAVNKLGGPENATPKSILKLMNVEGLNIYHIKSHLQKYRL 296 68****************************************************8 PP
2	Myb_DNA-binding	55.3	1.6e-17	246	295	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT e++e ++dav++lGg+ t+k+I + m+ +g+ +++ks++qky+ XP_023884782.1 246 RWTSELHEHFLDAVNKLGGPenaTPKSILKLMNvEGLNIYHIKSHLQKYR 295 9************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MNLPRNTSIS QGENLREVLQ THLIGSSPVH ITSIMDSQGL YSLKCSSSPA VLPHCIQPKP 60 PNSLTQIPSP KNKKLYAKHL SDESDSSCTQ NPKSTFAPSS MFCSSLHFSS STSPETSRYL 120 GNEPFLPNPQ IYDWCPPAVN SPKPSSLSGG GENGRCGKET SFDLMKGFEY NIPGQCSDGI 180 FWGENYASDS LTLSQQLEVQ NFSEELNIAI NDTSDNPRLD EIYESPQISQ IKEFPEATAA 240 HKARIRWTSE LHEHFLDAVN KLGGPENATP KSILKLMNVE GLNIYHIKSH LQKYRLAKNV 300 PELKHDGETS SFEQKKSAST NNDNEECITR NNSITEALRM QLEVQKQLHE QLKVQKSLQL 360 LIEQHGEYLK KLLEEQEKVG APLIPASASP PRPAESKTDS SSSSLSKHKP SDSDSIESEQ 420 LSGQKRPRQ

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MNLPRNTSIS QGENLREVLQ THLIGSSPVH ITSIMDSQGL YSLKCSSSPA VLPHCIQPKP  60
PNSLTQIPSP KNKKLYAKHL SDESDSSCTQ NPKSTFAPSS MFCSSLHFSS STSPETSRYL  120
GNEPFLPNPQ IYDWCPPAVN SPKPSSLSGG GENGRCGKET SFDLMKGFEY NIPGQCSDGI  180
FWGENYASDS LTLSQQLEVQ NFSEELNIAI NDTSDNPRLD EIYESPQISQ IKEFPEATAA  240
HKARIRWTSE LHEHFLDAVN KLGGPENATP KSILKLMNVE GLNIYHIKSH LQKYRLAKNV  300
PELKHDGETS SFEQKKSAST NNDNEECITR NNSITEALRM QLEVQKQLHE QLKVQKSLQL  360
LIEQHGEYLK KLLEEQEKVG APLIPASASP PRPAESKTDS SSSSLSKHKP SDSDSIESEQ  420
LSGQKRPRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	5e-68	G2-like family protein