PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023884758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 246aa MW: 28145 Da PI: 9.8593 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 130.6 | 1.1e-40 | 15 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp G+rFhPtdeelvv+yLk+kv + ++++ +vi+e+d+++++Pw Lp + +++ yfFs+r++ ++++++ra+ sgyWk gkdk++l++ XP_023884758.1 15 LPIGYRFHPTDEELVVHYLKRKVFSIPFPA-SVIPEFDVFQTDPWGLPGDL---NEKRYFFSSRKSV--NENKSKRAAGSGYWKPIGKDKQILAS 103 699***************************.99***************544...4678****98776..567999******************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg++k L+f +g+++ g+kt+Wvmheyrl XP_023884758.1 104 gSNQAVGMRKALIFCEGKRSYGTKTRWVMHEYRL 137 66778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MDQRPNFVIQ GGFKLPIGYR FHPTDEELVV HYLKRKVFSI PFPASVIPEF DVFQTDPWGL 60 PGDLNEKRYF FSSRKSVNEN KSKRAAGSGY WKPIGKDKQI LASGSNQAVG MRKALIFCEG 120 KRSYGTKTRW VMHEYRLVDS QTNTYSTQVS EIEKEDWVIY CVLKRKKRNE KRGAISQPSK 180 RKKVQSLEVI RPSFMNSKVE ESSDLGPPQP SASCSSVITD IRPNELDQEE TSSHISFSSF 240 SCMREA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 183 | KRKKRNEKRGAISQPSKRKK |
2 | 165 | 184 | KRKKRNEKRGAISQPSKRKK |
3 | 166 | 185 | KRKKRNEKRGAISQPSKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-54 | NAC family protein |