PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884712.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 267aa MW: 30708.1 Da PI: 5.2112

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.2e-14	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++k++G +W+ ++ g+ R++k+c++rw +yl XP_023884712.1 15 KGAWTPEEDKKLTAYIKRYGIWNWSQMPKPAGLARSGKSCRLRWMNYL 62 79****************99**********************97 PP
2	Myb_DNA-binding	56.1	8.7e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++l XP_023884712.1 68 RGNFSKEEEETILKCHDELGNR-WSAIAAMLP-GRTDNEIKNYWHSHL 113 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MVKAQHAEEK TPLRKGAWTP EEDKKLTAYI KRYGIWNWSQ MPKPAGLARS GKSCRLRWMN 60 YLRPDIKRGN FSKEEEETIL KCHDELGNRW SAIAAMLPGR TDNEIKNYWH SHLKKRFRNN 120 WSTSSTTASL TVQNWDVEAN QNDSSGINLL HCDASKPSNL DGNHPMSPQL STDDPSSSST 180 DPAVEIDRNQ TIEENVCSSE TFEELQSFWE QPFSLEDLCM VETDPAGFVA QTTRTCFPEP 240 IYPCISYEDV HHDLWFNLPN HEEMHGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-52	MYB family protein