PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023884520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 287aa MW: 32240.4 Da PI: 8.5615 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 142 | 196 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F+++ +++ +++++LA+kl+L rqV vWFqNrRa+ k XP_023884520.1 142 RKKLRLTKEQSAILEDNFKEHATLNPKQKQDLAHKLNLRPRQVEVWFQNRRARTK 196 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 121.4 | 4.5e-39 | 142 | 230 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+keq+++LE++F+e+ +L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++l++en++L+ke +eL+ + XP_023884520.1 142 RKKLRLTKEQSAILEDNFKEHATLNPKQKQDLAHKLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCERLTDENKKLQKELQELK-S 230 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MGPDDVCNAG LALALGSHDK QENHDHLQPD HHQEKNKKKR KKKKFSLKYD HLFPSLTLGP 60 SDETSYTYQL ATTKKEAGKA VLGGDSVDYL PNKQASSLSA VSSFSNSSSI KRERELSGGE 120 EEVEVERVSS RVSDEDEEAS PRKKLRLTKE QSAILEDNFK EHATLNPKQK QDLAHKLNLR 180 PRQVEVWFQN RRARTKLKQT EVDCELLKKC CERLTDENKK LQKELQELKS LKLAAPFYMQ 240 LPAATLTMCP SCERICNGGD GSSTSPFSIG PSKPHFFNPF THPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 36 | 43 | NKKKRKKK |
2 | 37 | 43 | KKKRKKK |
3 | 38 | 44 | KKKRKKK |
4 | 38 | 42 | KKRKK |
5 | 191 | 199 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-64 | HD-ZIP family protein |