PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023884335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 470aa MW: 51945.9 Da PI: 4.5065 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128 | 7.2e-40 | 20 | 143 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 pG+rF+Ptd elv+++L +kv g+k+++ evi+evd+ykv PwdLp k++ +++ +wyf ++ +kky+ g r nrat+ g Wk tg++++v+ + XP_023884335.1 20 PGVRFNPTDVELVMFFLLRKVMGRKCPV-EVIAEVDVYKVSPWDLPdKSIVKGDLKWYFLCPIEKKYSAGARMNRATDVGHWKITGNERPVHY-D 112 9***************************.99***************777778888**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++lvg ktL+f+ g+ap ++tdWv+heyrl XP_023884335.1 113 NTLVGSIKTLIFHMGKAPG-KRTDWVIHEYRL 143 99***********999986.9*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MESRNSGLDH LMGKELFPFP GVRFNPTDVE LVMFFLLRKV MGRKCPVEVI AEVDVYKVSP 60 WDLPDKSIVK GDLKWYFLCP IEKKYSAGAR MNRATDVGHW KITGNERPVH YDNTLVGSIK 120 TLIFHMGKAP GKRTDWVIHE YRLDNKYLAK RGVAQNGHVL CMIFHKEGLG PKNNAQYGAP 180 FKEEDWNDDG EVGFVEVASS GFPTPASVLP NNYSSSLAAG TSQCDGTASE SYLSETVLSE 240 CEVLPAVHSI NVVSKEFNQV YDGDVTSSTL EVLNEDKKNK NPIHDRTDAA ALPVDESTIY 300 KDLGDLVNTA GLSEGGYNFS IGSPDNCLYM GDLRKPLPPE AGESQHVSTN DQYPGFNANI 360 YSEQSPLSSC DAAQQISVSD ACDPLPGFKN VSHNGLAELP SDEPEIYEGL GDLGNTFGQG 420 CNFSTVYLDD ILSMEDLETE AGEPQQVSDL YQIVFPNQKE RKRKRQEDND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 1e-74 | NAC family protein |