PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023884050.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 224aa    MW: 24503.4 Da    PI: 7.6607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023884050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.4e-1374118655
             AP2   6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++++g+Wv+eIr p+    + +r++lg++ t ++Aa a++ a+++l+g
  XP_023884050.1  74 A--RSRSGKWVSEIRQPR----KaTRIWLGTYPTRDMAATAYDVAALALKG 118
                     5..5789*********84....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAKNPNVRRN NPYRTANVRR EEQTLNSNTT ATISTSSSTI TTATSPISVS EGFSGEPGSL  60
SSSTTAKQKK FRGARSRSGK WVSEIRQPRK ATRIWLGTYP TRDMAATAYD VAALALKGPD  120
TVLNFPDLIL WYPIPLSMSP VDIRAAAASA AEKMMERSSE SSHEATHLRS TEEGYFIDEE  180
ELLNMPSLLV NMAEGMLLTP PRIQSKSSSD ESGGDGDGLW NYSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-34ERF family protein