PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 92aa MW: 10472.8 Da PI: 10.18 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.2 | 2.1e-09 | 13 | 57 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 ++WT+ +++ +a +++ ++ +W +a+ +g g+++++++ ++ XP_023883951.1 13 NSWTPKQNKQFERALALYDKDtpdRWQNVAKAVG-GKSAEEVRRHY 57 58********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MASSSLNSSR GSNSWTPKQN KQFERALALY DKDTPDRWQN VAKAVGGKSA EEVRRHYEIL 60 IQDLINIEAG QIPLPNYKNS GNNERLMKNL RL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 9e-39 | MYB_related family protein |