PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 18168 Da PI: 8.8224 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 23 | 74 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+++AeIrdp+ g +r +lg+f+tae+Aa+a+++a+ +l+g+ XP_023883911.1 23 RFRGVRRRP-WGKFAAEIRDPTRHG--ARQWLGTFDTAEDAARAYDRAAFNLRGH 74 69*******.**********96544..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MEESQKGKED KKGKEDKAKE EVRFRGVRRR PWGKFAAEIR DPTRHGARQW LGTFDTAEDA 60 ARAYDRAAFN LRGHLAVLNF PNEYYSQVMG SPPYPPHLSS FSSTSSTTSS SAPSTGNFER 120 GGGSSSSRQE KQVFEFEYLD DKVLEDLLEP EEEKKKRNRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 9e-30 | ERF family protein |