PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883901.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 224aa MW: 25499.8 Da PI: 5.9259

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.6	2.1e-08	73	120	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RR+r+N++f L ++l ++ + K +K +iL A++ +++L XP_023883901.1 73 SKACREKLRRERLNDRFLDLCSVLDPD---RPVKIDKHAILDDAIRVLNQL 120 6778********************9...99**************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MDPLPEDWDF LNYSIFDENP SSEFCLPNHS GGVETDLSSG AVALSQQEKD GAEIECSQSR 60 KRGRNDSYSR PGSKACREKL RRERLNDRFL DLCSVLDPDR PVKIDKHAIL DDAIRVLNQL 120 RSESQELKET NEKLKEEIKS LKAEKHELRE EKLMLKADKE RMEQQLKAMA IPPAGFMPGH 180 PAAYHAGPNK MPVFPSYGFV PMWQYMPPAA RDTSHDHELR PPAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14410.2	2e-67	bHLH family protein