PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883810.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 273aa    MW: 30228.6 Da    PI: 6.157
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.2e-055577123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_023883810.1 55 YTCSFCNREFRSAQALGGHMNVH 77
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MEQAPYWMWT KRKQVLQSHF PPSMNSFNSS SWEEKAFAED SAGTLGGCVW PPRSYTCSFC  60
NREFRSAQAL GGHMNVHRRD RARLKQSLSP SNEPLHKSLE GQFSTEINSK LSHNLFSISC  120
PSEHNFKSAY SCSSSVQSWS NPVGVGLLSI SESNPEVGKN QRDQEDSVGL GYDDDYVETD  180
LSVGMNSFVS QNRPTGSCGD EAAICKKPKT AVSSLSFVLK QFSDDRYHLQ SEVLEVLSPS  240
TMEGLDLELR LGNTPNVKVS NRDIAGYTGN LCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.15e-27C2H2 family protein