PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 227aa MW: 25244.2 Da PI: 10.5714 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.9 | 5.1e-15 | 129 | 215 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ps+v +l lp +f++ + +++ ++ +tl de+g ++ + rk++ l++GWk+F+ a++L gD vvF+l+gr++f +v ++r XP_023883749.1 129 SMQPSHVAGGFWLGLPVDFCKLN-LPS-RDDVMTLIDEDGDEYPTIYLARKRG----LSGGWKGFAVAHHLVHGDAVVFQLIGRTTF--KVYIIR 215 578999**************666.443.4558***************555555....9*************************9988..888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MVVAKQSYED SRRKRVEENK KRMEALNLPL LSQALKTSPK PSPTKQAKPR VVQKQLVVVR 60 RSTRFANKPA PIYKEVAVDR VAIPRRILGR QRNLSNLVLA SPEAIAEADE KAEKLVLGLP 120 PGYPILTRSM QPSHVAGGFW LGLPVDFCKL NLPSRDDVMT LIDEDGDEYP TIYLARKRGL 180 SGGWKGFAVA HHLVHGDAVV FQLIGRTTFK VYIIRVNGSE EGNNGAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 5e-67 | B3 family protein |