PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883748.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 204aa    MW: 22884.4 Da    PI: 9.1211
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.31.8e-15107196198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f k +++++v+   +l lp +f+ ++ ++k ++  +tl de+g ++   +    ++ +  lt+GWk+F+ a++L +gD vvF+l++ ++f  +v 
  XP_023883748.1 107 FTKSMLRPHVTGGFWLGLPIQFCFRN-LPK-RNAVMTLIDEDGDEYPTIY--LVHKIG--LTGGWKGFAVAHHLVVGDAVVFQLIWPTTF--KVY 193
                     899********************777.443.5679***************..666643..**************************8777..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023883748.1 194 IIR 196
                     876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLVAKQSYEE SRGNRVEVNK KRMEALNLSL YEAGQTPCGA EAVGRGQEVH SLCQKRVAVD  60
SVAIPRRIFG RQRELSNRVN ASPEARAEAQ EKVEKLEMGL EPVYPTFTKS MLRPHVTGGF  120
WLGLPIQFCF RNLPKRNAVM TLIDEDGDEY PTIYLVHKIG LTGGWKGFAV AHHLVVGDAV  180
VFQLIWPTTF KVYIIRVKGS EEGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.16e-61B3 family protein