PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883560.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 359aa MW: 41924.4 Da PI: 4.2205

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.4	1.4e-19	28	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 +rF+Pt e+v +yL +kv gk+l++ +v+ e+d+y+ ++ +++e+++yfF+k ++ +g+r +r t+ g+Wk+ +k++++ k+ XP_023883560.1 28 IRFRPTYVEIVEHYLYNKVYGKPLSA-DVLIECDLYEESWKKHF--ENTDESSLYFFTKLKR-VGNGSRIQRNTTYGTWKSNN-EKPIYRDqaKK 117 79*********************9.9999996644432..2446678899999877.579**********875.59999876777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++g ++L++ +++ +k + +Wvm ey+l XP_023883560.1 118 DQIGSVRSLTLVTKKGSK-SVGRWVMYEYKL 147 88******666655.789*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAISYSHTES NIMALMDFDD DYGDLPWIRF RPTYVEIVEH YLYNKVYGKP LSADVLIECD 60 LYEESWKKHF ENTDESSLYF FTKLKRVGNG SRIQRNTTYG TWKSNNEKPI YRDQAKKDQI 120 GSVRSLTLVT KKGSKSVGRW VMYEYKLKGR LYNKEYEDYV ICRIERLKQQ EDKNLNEDTQ 180 NIEQFVKSFE QQKDGVTNTM IETETQLGRH QQDRLEQKED SFINEQSFET TEQLQDGMTE 240 IETELDPHVV LTVEELEALL GWDRLEQKED GLKNEGIQNI EQSFETTAQL QDGMTEIETD 300 QVDTNAVLTV EELEALLSEP SEDTSFPVGC DWALDTSSST FMQSMPYQTY YTDTTTICI

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAISYSHTES NIMALMDFDD DYGDLPWIRF RPTYVEIVEH YLYNKVYGKP LSADVLIECD  60
LYEESWKKHF ENTDESSLYF FTKLKRVGNG SRIQRNTTYG TWKSNNEKPI YRDQAKKDQI  120
GSVRSLTLVT KKGSKSVGRW VMYEYKLKGR LYNKEYEDYV ICRIERLKQQ EDKNLNEDTQ  180
NIEQFVKSFE QQKDGVTNTM IETETQLGRH QQDRLEQKED SFINEQSFET TEQLQDGMTE  240
IETELDPHVV LTVEELEALL GWDRLEQKED GLKNEGIQNI EQSFETTAQL QDGMTEIETD  300
QVDTNAVLTV EELEALLSEP SEDTSFPVGC DWALDTSSST FMQSMPYQTY YTDTTTICI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	3e-16	NAC family protein