PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | bHLH | ||||||||
Protein Properties | Length: 275aa MW: 31120.4 Da PI: 7.5003 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.2 | 4e-05 | 167 | 205 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rR +++ +++ L++l+ + +K + a++L++A YIk L XP_023883514.1 167 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASLYIKLL 205 7999**************99.....9****************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MRNALLQPMS SQLHSFGINQ VQVPNLDVSM AMPMDSEVNV HGSGFCENQL LGNECFTVPF 60 GSPINYSYES GYQSGGTSIC TDIPQQLMLL SQKPSIPQSE ETMPNARKRP IEVNDLLPKT 120 GTDILDNMME LKEWKRNKTT TTEKQWQHQV RGAPTQIQEQ RLHVPVRRSQ KLSDKITALQ 180 KLVSPYGKTD TASVLQEASL YIKLLHEQIQ NLFQLLSSSY KSSSQQPQEI GEQLNLRSKG 240 LCLVPVSITQ RVKMESPFDH DDLCWKPITQ SYRNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31730.1 | 1e-18 | bHLH family protein |