PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883435.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ARR-B
Protein Properties Length: 698aa    MW: 76534.1 Da    PI: 6.294
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.53e-28205258155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ +LH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_023883435.1 205 KPRVVWSVDLHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 258
                     79*******************.********************************8 PP
2Myb_DNA-binding37.17.5e-12207257148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ +++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
   XP_023883435.1 207 RVVWSVDLHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 257
                      678********************************99*************7 PP
3Response_reg76.87.7e-26201281109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ + ll+++l++ +y +v+++ ++ +al+ll+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++ +g+ +++ + +  G
  XP_023883435.1  20 VLAVDDDPTCLFLLEKLLRRCQY-HVTTTNQAIKALNLLRENKdqFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSINGDTKLVMKGITHG 112
                     799********************.***************888889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_023883435.1 113 ACDYLLKPVRIEELKN 128
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MTVEAEIDDP RDQFPIGMRV LAVDDDPTCL FLLEKLLRRC QYHVTTTNQA IKALNLLREN  60
KDQFDLVISD VQMPDMDGFK LLELVGLEMD LPVIMLSING DTKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKFD SKDRNNCGNQ EKLHSGSVEG GPGSAGTLLD QNGKLNKKRK  180
DQDEEEFEEH DENGPDNDDP SNQKKPRVVW SVDLHRKFVA AVNQLGIDKA VPKKILDLMN  240
VEKLTRENVA SHLQKYRLYL KRISCVANQQ ANMVAALGGT DASFLQMSSL NGAGNFQTLN  300
GSGQFHNTAF RSFPPSGMLG RLSTSAGLGI HSLPSSGMTQ LGHSQNSGSS TIDQVNFQQV  360
IIPGNHNGSV LQGVPMSLQL DQLQHNKSVT RVRELSTAVD NTTVFPISSG LPDARMTIGS  420
SSNPLLGVTN NTLMLEGAPQ GAQTGKVFGN HSSVSFASLN SGLSSPLPDH RRLNDNWSTA  480
QSSGIQSNSF SLNDTFKQAT MQPSNLRDNM STMALQIGCD PCNVSSVSSI STQSQDLRAD  540
VQCRTNLISS NAGQVSNNAL AQRWDDHDQD GSYHSNVMCS SINSMIPVNG TVGPLGQHLG  600
PKNTIFHTNM DFNSMEQSNF IDPLYMNHNE VNKSTMETSL KLKQGLFMDQ RKPQGSFISG  660
NFGSLEDIVS AMAKQEQDKL KLIEGDFGCD PYSLGTCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-142ARR-B family protein