PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ARR-B | ||||||||
Protein Properties | Length: 233aa MW: 25806.2 Da PI: 4.9815 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30.8 | 6.4e-10 | 97 | 129 | 26 | 55 |
G2-like 26 kAtPktilelmk...vkgLtlehvkSHLQkYRl 55 kAtP +il+ mk v++Lt+ehv S LQkYR XP_023883393.1 97 KATPNKILNRMKaqgVQCLTREHVSSYLQKYRK 129 8**********7333677**************6 PP | |||||||
2 | Response_reg | 38.9 | 4.6e-14 | 21 | 100 | 1 | 79 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvta 79 vlivd++ ++ll+++l++ +y eva + g++al llk+++ +D+il+ +p+md ++ll ++ ++ +lp+i t XP_023883393.1 21 VLIVDENLESLHLLETMLKQCDY-EVAKCNRGKDALSLLKNSRsntFDIILTERCLPDMDEITLLGKLSKAT-DLPVIKATP 100 8**********************.***************9999999**********************8887.899998773 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MKSALEKSDN TSCEFPAGMR VLIVDENLES LHLLETMLKQ CDYEVAKCNR GKDALSLLKN 60 SRSNTFDIIL TERCLPDMDE ITLLGKLSKA TDLPVIKATP NKILNRMKAQ GVQCLTREHV 120 SSYLQKYRKK QLSGNDEVLN TKQLELSNIG TQAVRNVAFH DRSSITEGST IYGNRSDTFM 180 AENVAAMGGK GPTYFPALEL SNHDNFLGDN PGDSAGINLD QLDDILVDYD ANI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.1 | 8e-20 | ARR-B family protein |