PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883376.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 1170aa MW: 131102 Da PI: 9.4664

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.1e-10	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_023883376.1 45 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSIEMV 80 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1170 aa Download sequence
MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKKYYD KLGPQWSKEE LERFYEAYRK 60 YGKDWKKVAA VVRNRSIEMV EALYTTNRAY LSLPEGTASV VGLIAMMTDY YNVLEESDSE 120 RESNEALTSE KPLKRKRGKV QPSVSKDPCQ TRSIASSDGY LSFLKRRRFD GNEPCAKGKR 180 TPRFPISYSL KRDDAEINVS PNKRGRKSDS DANDDEVAHG AALALAEVSQ RGGSPQISQT 240 PYRRTEHIKS APLRTWGKMN QQSDTAQANL RYAAMDENWL EGSIGSRGVE NGDYARDTSS 300 LMDMEGVGTV EVHRKGKKFY RKKEKVQDIA NHQYDDGGEA CSGTEEGLNS GVSKGKFDIE 360 VSNSKSERFS PQGQRKRSKK LSFGGESTGL DALLELADLS LKMPISTMES DSSVQLKEER 420 AILDMDDKAS LPEAMSTSHC ADKIKFLGSK QKARHTIAGV DGTNSRKLKI GRDSDIDVNV 480 ASEEKEQLQL ADKAWKRKRK SMVSKISNDK AHTDSLLSEP LKTEVLAEEE NKPVIIGKRT 540 GQSFTFLKPW KSVRSSDGSL DSDQKRAETD LSVSTTEIPA ASQSSLSSKR KSKRKMGQPK 600 PFLKETKSSH GNRFINRHKY STSLSDRPPY LKQVLLCCLS SSLVRRWCTF EWFYSAIDYP 660 WFAKREFVEY LNHVGLGHIP RLTRVEWGVI RSSLGKPRRF SEHFLLEERE KLKQYRDSVR 720 KHYTELRTGI REGLPTDLAR PLSVGQRVIA LHPKTRELHD GSVLTVDQDK CRVQFDRPEI 780 GVWFVKDIDC MPLNPLDNMP EALKRQNITI DKFSLLSKEP QMNGHPNFGG SMMFASSGNL 840 DKVTSPMNTF VQQGKVDTNH AIAQAKTAAI DIGSLQQEAH SQPSMLPQNH AKEADIRALT 900 ELTRALDKKE ALLMELRSTN NDIVENQNEG DCSLKDSEPF KKHYAMVSSA LLNLRQRNTY 960 PGNTLHPWLK PPSNSSLNGS LTSCYDNSFI SQESGSSVVE IVNGSRLRAR TMVDAAIQAF 1020 TFRKEGEDAF VRIGETLDSI DNQQLTSDSG IPVIRSQQQV NGGLGNQNQL SSCKAEPLFS 1080 SDASGAKPCN DSDENEARIP SGLITSCVAT LLMIQTCTER QYPPADVAQI LDSALKSLHP 1140 YCTQNLSIYR EIQMCMGRIK TQILALVPTT

Sequence ? help Back to Top

Protein Sequence Length: 1170 aa Download sequence

MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKKYYD KLGPQWSKEE LERFYEAYRK  60
YGKDWKKVAA VVRNRSIEMV EALYTTNRAY LSLPEGTASV VGLIAMMTDY YNVLEESDSE  120
RESNEALTSE KPLKRKRGKV QPSVSKDPCQ TRSIASSDGY LSFLKRRRFD GNEPCAKGKR  180
TPRFPISYSL KRDDAEINVS PNKRGRKSDS DANDDEVAHG AALALAEVSQ RGGSPQISQT  240
PYRRTEHIKS APLRTWGKMN QQSDTAQANL RYAAMDENWL EGSIGSRGVE NGDYARDTSS  300
LMDMEGVGTV EVHRKGKKFY RKKEKVQDIA NHQYDDGGEA CSGTEEGLNS GVSKGKFDIE  360
VSNSKSERFS PQGQRKRSKK LSFGGESTGL DALLELADLS LKMPISTMES DSSVQLKEER  420
AILDMDDKAS LPEAMSTSHC ADKIKFLGSK QKARHTIAGV DGTNSRKLKI GRDSDIDVNV  480
ASEEKEQLQL ADKAWKRKRK SMVSKISNDK AHTDSLLSEP LKTEVLAEEE NKPVIIGKRT  540
GQSFTFLKPW KSVRSSDGSL DSDQKRAETD LSVSTTEIPA ASQSSLSSKR KSKRKMGQPK  600
PFLKETKSSH GNRFINRHKY STSLSDRPPY LKQVLLCCLS SSLVRRWCTF EWFYSAIDYP  660
WFAKREFVEY LNHVGLGHIP RLTRVEWGVI RSSLGKPRRF SEHFLLEERE KLKQYRDSVR  720
KHYTELRTGI REGLPTDLAR PLSVGQRVIA LHPKTRELHD GSVLTVDQDK CRVQFDRPEI  780
GVWFVKDIDC MPLNPLDNMP EALKRQNITI DKFSLLSKEP QMNGHPNFGG SMMFASSGNL  840
DKVTSPMNTF VQQGKVDTNH AIAQAKTAAI DIGSLQQEAH SQPSMLPQNH AKEADIRALT  900
ELTRALDKKE ALLMELRSTN NDIVENQNEG DCSLKDSEPF KKHYAMVSSA LLNLRQRNTY  960
PGNTLHPWLK PPSNSSLNGS LTSCYDNSFI SQESGSSVVE IVNGSRLRAR TMVDAAIQAF  1020
TFRKEGEDAF VRIGETLDSI DNQQLTSDSG IPVIRSQQQV NGGLGNQNQL SSCKAEPLFS  1080
SDASGAKPCN DSDENEARIP SGLITSCVAT LLMIQTCTER QYPPADVAQI LDSALKSLHP  1140
YCTQNLSIYR EIQMCMGRIK TQILALVPTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	589	596	KRKSKRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein