PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023883374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 1181aa MW: 132255 Da PI: 9.4645 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.5 | 4.1e-10 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_023883374.1 45 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSIEMV 80 6*****************99.*********.**98876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1181 aa Download sequence |
MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKKYYD KLGPQWSKEE LERFYEAYRK 60 YGKDWKKVAA VVRNRSIEMV EALYTTNRAY LSLPEGTASV VGLIAMMTDY YNVLEESDSE 120 RESNEALTSE KPLKRKRGKV QPSVSKDPCQ TRSIASSDGY LSFLKRRRFD GNEPCAKGKR 180 TPRFPISYSL KRDDAEINVS PNKRGRKSDS DANDDEVAHG AALALAEVSQ RGGSPQISQT 240 PYRRTEHIKS APLRTWGKMN QQSDTAQANL RYAAMDENWL EGSIGSRGVE NGDYARDTSS 300 LMDMEGVGTV EVHRKGKKFY RKKEKVQDIA NHQYDDGGEA CSGTEEGLNS GVSKGKFDIE 360 VSNSKSERFS PQGQRKRSKK LSFGGESTGL DALLELADLS LKMPISTMES DSSVQLKEER 420 AILDMDDKAS LPEAMSTSHC ADKIKFLGSK QKARHTIAGV DGTNSRKLKI GRDSDIDVNV 480 ASEEKEQLQL ADKAWKRKRK SMVSKISNDK AHTDSLLSEP LKTEVLAEEE NKPVIIGKRT 540 GQSFTFLKPW KSVRSSDGSL DSDQKRAETD LSVSTTEIPA ASQSSLSSKR KSKRKMGQPK 600 PFLKETKSSH GNRFINRHKY STSLSDRPPY LKQVLLCCLS SSLVRRWCTF EWFYSAIDYP 660 WFAKREFVEY LNHVGLGHIP RLTRVEWGVI RSSLGKPRRF SEHFLLEERE KLKQYRDSVR 720 KHYTELRTGI REGLPTDLAR PLSVGQRVIA LHPKTRELHD GSVLTVDQDK CRVQFDRPEI 780 GVWFVKDIDC MPLNPLDNMP EALKRQNITI DKFSLLSKEP QMNGHPNFGG SMMFASSGNL 840 DKVTSPMNTF VQQGKVDTNH AIAQAKTAAI DIGSLQQEAH SQPSMLPQNH AKEADIRALT 900 ELTRALDKKE ALLMELRSTN NDIVENQNEG DCSLKDSEPF KKHYAMVLVQ LKEASGQVSS 960 ALLNLRQRNT YPGNTLHPWL KPPSNSSLNG SLTSCYDNSF ISQESGSSVV EIVNGSRLRA 1020 RTMVDAAIQA FTFRKEGEDA FVRIGETLDS IDNQQLTSDS GIPVIRSQQQ VNGGLGNQNQ 1080 LSSCKAEPLF SSDASGAKPC NDSDENEARI PSGLITSCVA TLLMIQTCTE RQYPPADVAQ 1140 ILDSALKSLH PYCTQNLSIY REIQMCMGRI KTQILALVPT T |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 589 | 596 | KRKSKRKM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |