PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883373.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 1182aa MW: 132368 Da PI: 9.4227

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.1e-10	44	79	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ Wk++a+ + +R+ +++ XP_023883373.1 44 QWSKEELERFYEAYRKYGKD-WKKVAAVVR-NRSIEMV 79 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1182 aa Download sequence
MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKYYDK LGPQWSKEEL ERFYEAYRKY 60 GKDWKKVAAV VRNRSIEMVE ALYTTNRAYL SLPEGTASVV GLIAMMTDYY NVLEESDSER 120 ESNEALTSEK PLKRKRGKVQ PSVSKDPCQT RSIASSDGYL SFLKRRRFDG NEPCAKGKRT 180 PRFPISYSLK RDDAEINVSP NKRGRKSDSD ANDDEVAHGA ALALAEVSQR GGSPQISQTP 240 YRRTEHIKSA PLRTWGKMNQ QSDTAQANLR YAAMDENWLE GSIGSRGVEN GDYARDTSSL 300 MDMEGVGTVE VHRKGKKFYR KKEKVQDIAN HQYDDGGEAC SGTEEGLNSG VSKGKFDIEV 360 SNSKSERFSP QGQRKRSKKL SFGGESTGLD ALLELADLSL KMPISTMESD SSVQLKEERA 420 ILDMDDKASL PEAMSTSHCA DKIKFLGSKQ KARHTIAGVD GTNSRKLKIG RDSDIDVNVA 480 SEEKEQLQLA DKAWKRKRKS MVSKLQISND KAHTDSLLSE PLKTEVLAEE ENKPVIIGKR 540 TGQSFTFLKP WKSVRSSDGS LDSDQKRAET DLSVSTTEIP AASQSSLSSK RKSKRKMGQP 600 KPFLKETKSS HGNRFINRHK YSTSLSDRPP YLKQVLLCCL SSSLVRRWCT FEWFYSAIDY 660 PWFAKREFVE YLNHVGLGHI PRLTRVEWGV IRSSLGKPRR FSEHFLLEER EKLKQYRDSV 720 RKHYTELRTG IREGLPTDLA RPLSVGQRVI ALHPKTRELH DGSVLTVDQD KCRVQFDRPE 780 IGVWFVKDID CMPLNPLDNM PEALKRQNIT IDKFSLLSKE PQMNGHPNFG GSMMFASSGN 840 LDKVTSPMNT FVQQGKVDTN HAIAQAKTAA IDIGSLQQEA HSQPSMLPQN HAKEADIRAL 900 TELTRALDKK EALLMELRST NNDIVENQNE GDCSLKDSEP FKKHYAMVLV QLKEASGQVS 960 SALLNLRQRN TYPGNTLHPW LKPPSNSSLN GSLTSCYDNS FISQESGSSV VEIVNGSRLR 1020 ARTMVDAAIQ AFTFRKEGED AFVRIGETLD SIDNQQLTSD SGIPVIRSQQ QVNGGLGNQN 1080 QLSSCKAEPL FSSDASGAKP CNDSDENEAR IPSGLITSCV ATLLMIQTCT ERQYPPADVA 1140 QILDSALKSL HPYCTQNLSI YREIQMCMGR IKTQILALVP TT

Sequence ? help Back to Top

Protein Sequence Length: 1182 aa Download sequence

MAPTRKSRSV KRFSTINEVP HEKDGRNLGK SKQRKKYYDK LGPQWSKEEL ERFYEAYRKY  60
GKDWKKVAAV VRNRSIEMVE ALYTTNRAYL SLPEGTASVV GLIAMMTDYY NVLEESDSER  120
ESNEALTSEK PLKRKRGKVQ PSVSKDPCQT RSIASSDGYL SFLKRRRFDG NEPCAKGKRT  180
PRFPISYSLK RDDAEINVSP NKRGRKSDSD ANDDEVAHGA ALALAEVSQR GGSPQISQTP  240
YRRTEHIKSA PLRTWGKMNQ QSDTAQANLR YAAMDENWLE GSIGSRGVEN GDYARDTSSL  300
MDMEGVGTVE VHRKGKKFYR KKEKVQDIAN HQYDDGGEAC SGTEEGLNSG VSKGKFDIEV  360
SNSKSERFSP QGQRKRSKKL SFGGESTGLD ALLELADLSL KMPISTMESD SSVQLKEERA  420
ILDMDDKASL PEAMSTSHCA DKIKFLGSKQ KARHTIAGVD GTNSRKLKIG RDSDIDVNVA  480
SEEKEQLQLA DKAWKRKRKS MVSKLQISND KAHTDSLLSE PLKTEVLAEE ENKPVIIGKR  540
TGQSFTFLKP WKSVRSSDGS LDSDQKRAET DLSVSTTEIP AASQSSLSSK RKSKRKMGQP  600
KPFLKETKSS HGNRFINRHK YSTSLSDRPP YLKQVLLCCL SSSLVRRWCT FEWFYSAIDY  660
PWFAKREFVE YLNHVGLGHI PRLTRVEWGV IRSSLGKPRR FSEHFLLEER EKLKQYRDSV  720
RKHYTELRTG IREGLPTDLA RPLSVGQRVI ALHPKTRELH DGSVLTVDQD KCRVQFDRPE  780
IGVWFVKDID CMPLNPLDNM PEALKRQNIT IDKFSLLSKE PQMNGHPNFG GSMMFASSGN  840
LDKVTSPMNT FVQQGKVDTN HAIAQAKTAA IDIGSLQQEA HSQPSMLPQN HAKEADIRAL  900
TELTRALDKK EALLMELRST NNDIVENQNE GDCSLKDSEP FKKHYAMVLV QLKEASGQVS  960
SALLNLRQRN TYPGNTLHPW LKPPSNSSLN GSLTSCYDNS FISQESGSSV VEIVNGSRLR  1020
ARTMVDAAIQ AFTFRKEGED AFVRIGETLD SIDNQQLTSD SGIPVIRSQQ QVNGGLGNQN  1080
QLSSCKAEPL FSSDASGAKP CNDSDENEAR IPSGLITSCV ATLLMIQTCT ERQYPPADVA  1140
QILDSALKSL HPYCTQNLSI YREIQMCMGR IKTQILALVP TT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	590	597	KRKSKRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein