PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023883298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 321aa MW: 36282.9 Da PI: 7.0364 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W++ ++ g+ R++k+c++rw++yl XP_023883298.1 14 RGLWSPEEDEKLINYITAYGHGCWSSLPKLAGLQRCGKSCRLRWLNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 41.4 | 3.4e-13 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l++++ lG++ W+ Ia+ ++ gRt++++k++w+ XP_023883298.1 67 RGSFSPQEAALIIELQGILGNK-WAQIAKQLP-GRTDNEVKNFWN 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MRNHSCCNKQ KVKRGLWSPE EDEKLINYIT AYGHGCWSSL PKLAGLQRCG KSCRLRWLNY 60 LKPDLKRGSF SPQEAALIIE LQGILGNKWA QIAKQLPGRT DNEVKNFWNS SIKKKLISHN 120 VHAITTSPDM HYNGNSEESF FSLNTNPSWI LSSQQDPLYL PTPTPMLHGF DHGDLKLDQT 180 NCGANLVQFP TPPPMAPPSN SSFYDPLWSL GYQPHEQFDP NQELQNFSTS GATQHYIGNK 240 RIGPSITAPH YDEDPLSSMI PKPCENISGN CCGMPYLCAS QDLDPLARLP HFPASFDYPH 300 DPYVPNNHME YMDMPSCHHR T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 1e-74 | MYB family protein |