PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023883171.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 653aa MW: 71599.5 Da PI: 6.3666

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023883171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.8e-07	518	574	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqkyl 48 r++W++ E+e lv + ++ g++W+ I + g k R q+k++ ++++ XP_023883171.1 518 RQPWSKAEEEALVTGLARVNGPHWSQILALYGrggavnellKDRNQVQLKDKARNLK 574 89************************************999*****9999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MDAEQSGGDL SSPWMRQPLP QESVVQASYI EDDTALRYPE HVDELATAPA AGANEIISTG 60 VKGAPPPLDQ QQQQQQHQQW NHQHASHLSS YPEASLFQQP FFFQQTDPSI YNSPWPPTEA 120 ALAAYGNAAA PAGHYNTSHV AGGALLAGAM PFFPEQSDVE ATTALGGAAD FPQAYSNLYP 180 TAYDCTESQA RPDVRSSSSL YYEDASMHLK IQSLSILEDL ARRLIYMIAR SNYAQLHDVM 240 HGKESEEAQA YATLKNLFDQ TRKVYSRETP FIDAVAIQLF QPGQQEIIRQ ANTATFISSI 300 LGAHDVSFFH LNEYFLETFV PLGHRVLKWQ GAIFLELKTQ TYISALMNSD GNPEAILDEL 360 FPSDLDAQIL SRHPDAPSLS PSEQDFIDRS RARKSYLLAE PSTQAAFQEL PKKYHWNDFV 420 REFVTCINKN VDHITNIPAR SQNPHSQHAT GRSTGAPEPD PHHHHHHHHP QTQPSQASST 480 TTTVHPTPHP ASTGPYPSAP TSTPPLGGKP ATPASSVRQP WSKAEEEALV TGLARVNGPH 540 WSQILALYGR GGAVNELLKD RNQVQLKDKA RNLKLWYLKM GRDVPPALRG VTGELRKRGG 600 ARARAALGLL DDEEPLKALD SGSAAEDVFE PALAPSSGLN RRGTGKGGGR SRG

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MDAEQSGGDL SSPWMRQPLP QESVVQASYI EDDTALRYPE HVDELATAPA AGANEIISTG  60
VKGAPPPLDQ QQQQQQHQQW NHQHASHLSS YPEASLFQQP FFFQQTDPSI YNSPWPPTEA  120
ALAAYGNAAA PAGHYNTSHV AGGALLAGAM PFFPEQSDVE ATTALGGAAD FPQAYSNLYP  180
TAYDCTESQA RPDVRSSSSL YYEDASMHLK IQSLSILEDL ARRLIYMIAR SNYAQLHDVM  240
HGKESEEAQA YATLKNLFDQ TRKVYSRETP FIDAVAIQLF QPGQQEIIRQ ANTATFISSI  300
LGAHDVSFFH LNEYFLETFV PLGHRVLKWQ GAIFLELKTQ TYISALMNSD GNPEAILDEL  360
FPSDLDAQIL SRHPDAPSLS PSEQDFIDRS RARKSYLLAE PSTQAAFQEL PKKYHWNDFV  420
REFVTCINKN VDHITNIPAR SQNPHSQHAT GRSTGAPEPD PHHHHHHHHP QTQPSQASST  480
TTTVHPTPHP ASTGPYPSAP TSTPPLGGKP ATPASSVRQP WSKAEEEALV TGLARVNGPH  540
WSQILALYGR GGAVNELLKD RNQVQLKDKA RNLKLWYLKM GRDVPPALRG VTGELRKRGG  600
ARARAALGLL DDEEPLKALD SGSAAEDVFE PALAPSSGLN RRGTGKGGGR SRG