PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023882990.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 565aa MW: 64304.1 Da PI: 4.8915

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023882990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.6	4.4e-48	40	167	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd el+++yLk+kv+g + ++ +vi+e+d+yk+ PwdLp ++++++++ewyfF++r+kk+a+g++ nra + gyWk +g+d+++ XP_023882990.1 40 LPPGFRFHPTDVELLNYYLKRKVTGAPSHF-QVISELDLYKYSPWDLPgrSQYQSSDNEWYFFCPRNKKHANGSKINRANEFGYWKVSGRDRTIS 133 79***********************988.99***********6447888999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++ glkk+Lvfy+gr p+g +t+Wvmheyrl XP_023882990.1 134 H-GEQNLGLKKILVFYTGRPPRGARTSWVMHEYRL 167 9.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MSEYGHMMRH ETSASWHMYA YMLLGCTIPA VSNSMENTFL PPGFRFHPTD VELLNYYLKR 60 KVTGAPSHFQ VISELDLYKY SPWDLPGRSQ YQSSDNEWYF FCPRNKKHAN GSKINRANEF 120 GYWKVSGRDR TISHGEQNLG LKKILVFYTG RPPRGARTSW VMHEYRLLDK DLDINIQDLY 180 VLCRVIYKSG VQSGTPLNQE NWDSCQDDML NNAAFESPQL PDQPPSQHVM ADDDQNMSMV 240 MKSMPVDTNV FSSSIEAFPI LTESSGEFTF SLEGDNNLTK VEETTWPVDN NNKNEDLFNF 300 NQSEYEAPPS WDGCDIFKDL EDLGFLAELN KINGHYICNS QAADCVTDQM LLEQNEFLRA 360 AKESEINPNR GFGVHYSERL YDPILDIPMP QSIDGEPVIL QEPHWSHETL DMSSKLMNNN 420 FEVTKINEDE VLSYNPATAP WELHKEYESF SVTESGTQSA IYSSLQSLLE SIPASHASAV 480 ENPVHNSGWS LGVQSLDKLL QINGSSKHPS PTHNYQMLNQ PWKRASPGKG YKFVAGLVVL 540 SGTSWFVLVL VVAKIARLLW KMIFS

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MSEYGHMMRH ETSASWHMYA YMLLGCTIPA VSNSMENTFL PPGFRFHPTD VELLNYYLKR  60
KVTGAPSHFQ VISELDLYKY SPWDLPGRSQ YQSSDNEWYF FCPRNKKHAN GSKINRANEF  120
GYWKVSGRDR TISHGEQNLG LKKILVFYTG RPPRGARTSW VMHEYRLLDK DLDINIQDLY  180
VLCRVIYKSG VQSGTPLNQE NWDSCQDDML NNAAFESPQL PDQPPSQHVM ADDDQNMSMV  240
MKSMPVDTNV FSSSIEAFPI LTESSGEFTF SLEGDNNLTK VEETTWPVDN NNKNEDLFNF  300
NQSEYEAPPS WDGCDIFKDL EDLGFLAELN KINGHYICNS QAADCVTDQM LLEQNEFLRA  360
AKESEINPNR GFGVHYSERL YDPILDIPMP QSIDGEPVIL QEPHWSHETL DMSSKLMNNN  420
FEVTKINEDE VLSYNPATAP WELHKEYESF SVTESGTQSA IYSSLQSLLE SIPASHASAV  480
ENPVHNSGWS LGVQSLDKLL QINGSSKHPS PTHNYQMLNQ PWKRASPGKG YKFVAGLVVL  540
SGTSWFVLVL VVAKIARLLW KMIFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	7e-59	NAC family protein