PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882917.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 305aa    MW: 34009.7 Da    PI: 6.2445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882917.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.19e-10218261755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_023882917.1 218 IAAKNRRERISERLKVLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 261
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MALAKDRMLH DSCMGSVHQL VPDLSSPGPN YAVDDDECNK VALQEVAGLE SAGYVKNVGV  60
NSNAFVFRAT NYQPAHEEAH SLINFKNGFL KTNNHKEEYS MWEGNFSDQS YQRNEISSKC  120
SSDPRLLAEF NCFQTASNYS SITSTTTKEN QHEDGAYGWL YSEEPVDNDS IQESATHETS  180
FHKRPHMGES TQASKKQFTN ANKKPKPKTS SSKDPQSIAA KNRRERISER LKVLQELVPN  240
GSKVDLVTML EKAISYVKFL QLQVKVLATD EFWPAQGGKA PDISQVKEAI DAILCSQRDT  300
DSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.14e-62bHLH family protein