PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023882723.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 172aa MW: 19526.1 Da PI: 4.9194 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 13 | 62 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++k +g+Wv+eIr+p gk++r++lg++ +e+Aa+a++ a++ l+g XP_023882723.1 13 TYRGVRRRK-WGKWVSEIREP---GKKTRIWLGSYEAPEMAAAAYDVAALHLRG 62 69****998.**********8...557*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEEPTNPNVV APTYRGVRRR KWGKWVSEIR EPGKKTRIWL GSYEAPEMAA AAYDVAALHL 60 RGRGARLNFP ELVDSLPRPK SSRAEDVQMA AQEAALRFRR PEMGSSGANV MPVRVGLSPS 120 QIQAINESPL DSPKMWMELT GALLFEENMV LYDNNVEFSD WEELQYESIW DS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 1e-54 | ERF family protein |