PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882260.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 347aa    MW: 39391.5 Da    PI: 4.4805
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13.1e-164590148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++T+eE+e +v++++ +G++ W++Ia++++ gR ++++k+ w+++l
   XP_023882260.1 45 RGNFTKEEEESIVKLHEAWGNK-WSKIASHLP-GRMDNEIKNVWNTHL 90
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MTGFLILHAQ SPQSTPTLIF HKGLLRCGKS CRLRWINYLW PDVKRGNFTK EEEESIVKLH  60
EAWGNKWSKI ASHLPGRMDN EIKNVWNTHL KKNLTMKEGN VHGDELSSIT SSSSSSSSPF  120
TSREKQNIGG GIEHQSEQVP VDKKPHEECN LTHDFEKIQG SQTEDTNQFN IGKDLIDQSS  180
SYSSYDSNVS NSSPVDALRP EEQMVLLFDY GEPFDVSNIL QEVNKPDVDS VNEIPFVTDV  240
DFWNMLDNLD SVMSNEVQHS EVNACQSSNF EEEGSKNVDE NKKWLRYLEN ELGLDAMEEE  300
NKDISTKDAA RLLVPENVLV SDIFKPETNP DMGYFETWPS LPHSSAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16490.11e-39MYB family protein