PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882172.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 182aa    MW: 20235.5 Da    PI: 5.3153
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182172156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f t+e+Aa+a++ a + ++g+
  XP_023882172.1 21 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVATLHFRGH 72
                    67*****999.**********8...557********************99988886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MEEEPNSSGN TSSTSHGAAS SSYRGVRKRK WGKWVSEIRE PGKKTRIWLG SFETPEMAAA  60
AYDVATLHFR GHEARLNFPE LVHSLPRPAS SNSEHIRMAA HEAALRLRGS AGVAEVGGGS  120
RSNMAPVTVR LSPSQIEAIN EFPLDSPSKM WMQMAMEESM TFSNDIEDNE WEDMQNDSLW  180
DP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-66ERF family protein