PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881994.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 264aa    MW: 28866.9 Da    PI: 4.5035
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.22.6e-1572122155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+eI++p   + r k+ slg+f+ta++A   +++a+++++g
  XP_023881994.1  72 CNYRGVRQRT-WGKWVVEICEP---N-RgKKLSLGTFDTADDATSSYDEAARAIYG 122
                     56*****999.*******9998...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGYLDQGVPM ESSKKRKTRG EGLSTAETLA KWRDYNAQLE SSGGDAKPTR KHSKGPKKGC  60
KKGKGGPENS GCNYRGVRQR TWGKWVVEIC EPNRGKKLSL GTFDTADDAT SSYDEAARAI  120
YGASARLNFP EFVSTVSGPT PARFKASANE EIQYAVMEAA SLVETNVKDE STAMPSTSSL  180
VKDESTGDNG QKELLAYSKN ELFDDAELTA LFEDIPLDFT YSVLDFGFDV NQLGFPDIEA  240
DMPSLVDTEG KDKLVNEYFD ADVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.29e-33ERF family protein