PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023881785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 265aa MW: 30053.5 Da PI: 8.3357 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.8e-17 | 20 | 65 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l +v+q+G+ +W+ Ia ++ gR++k+c++rw++ XP_023881785.1 20 RGHWKPAEDEKLQLLVEQHGPQNWNFIADHLE-GRSGKSCRLRWYNQ 65 899*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 72 | 114 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++TteE+++l+ a++ +G++ W+ Iar++ gRt++ +k+ ++ XP_023881785.1 72 KNPFTTEEEQRLLAAHQIYGNK-WSFIARYFK-GRTDNTVKNQYH 114 689*******************.********9.*********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MKKSRSSISS DSESGKICYR GHWKPAEDEK LQLLVEQHGP QNWNFIADHL EGRSGKSCRL 60 RWYNQLDPNI NKNPFTTEEE QRLLAAHQIY GNKWSFIARY FKGRTDNTVK NQYHIMMARR 120 KRERFSVQGH RSHSKFQNLQ KLGTSSMSSL HSLSFSQSTM TTDSFSVDIF GGGRKKDLGP 180 SISSCANDYE PSHGIPVVHE VVPQSFKFSN FAGVYESEEM LNVEGLDDNS NACWNLKMAS 240 DQDQGDGSIT HKAVPFIDFF GVGIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33450.1 | 5e-58 | MYB family protein |