PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881637.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 303aa    MW: 34073.2 Da    PI: 5.7173
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.12.7e-30191581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy 82 
                     lppG+rFhP+++elv++yL+ k ++ +       ++  + i+e+++++++P +Lp        + +++++wy +++++++     r++r+tk+gy
  XP_023881637.1  19 LPPGCRFHPSQQELVSYYLASKNRDPDpnpdenfFNGYDLIRELNLFDYDPFELPDdtcfsyGFGGRKRHWYCYCCASSS---RIRSRRKTKNGY 110
                     79*********************99987666655555568**************954677665555888*******9876...4799******** PP

             NAM  83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                     Wk  gk ++v+   ++ +vg +k++vfy g++p++  +t+Wv+ ey+l
  XP_023881637.1 111 WKRNGKVRDVVGPcGRVQVGSRKSFVFYLGNSPETAfRTSWVLYEYAL 158
                     ***********9978889**********998877655*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGDPIPSTQK LKPTTSFSLP PGCRFHPSQQ ELVSYYLASK NRDPDPNPDE NFFNGYDLIR  60
ELNLFDYDPF ELPDDTCFSY GFGGRKRHWY CYCCASSSRI RSRRKTKNGY WKRNGKVRDV  120
VGPCGRVQVG SRKSFVFYLG NSPETAFRTS WVLYEYALAD HLKASFVVCR VFSKSRAGNS  180
ISDNGLSSCA EESVSAVRHI GIQHDGYFTP DSVEAKIQGD NSVDGNNEIP RYPMQLGSEL  240
EDQIMTRPVS VASPPFPSVM QPRELVSSTG LPGSGLMFVE GLTDRQLFSI VEEDFIELND  300
LMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.18e-24NAC family protein