PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881628.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 772aa MW: 85880.2 Da PI: 5.6483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.8	5.2e-13	7	52	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g WT Ede+l+ av ++G ++W+++a+ + ++t+kqck rw +l XP_023881628.1 7 GVWTNIEDEILKAAVSKYGLNQWARVASLLA-RKTAKQCKARWAEWL 52 78***************************.*********8775 PP
2	Myb_DNA-binding	34.8	4e-11	60	102	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W+ eEde+l+++ k++++ W+tIa +g Rt+ qc +r+qk+l XP_023881628.1 60 EWSREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTATQCLERYQKLL 102 6***************99.****8..**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MPVVKGGVWT NIEDEILKAA VSKYGLNQWA RVASLLARKT AKQCKARWAE WLDPGIRKIE 60 WSREEDEKLL HLAKLMPTQW RTIAPIVGRT ATQCLERYQK LLDEAEAREN AGELGLGGPE 120 GGETSAPSAD DVRRLRPGEL DPDPESKPAR PDTIDLDEDE KEMLSEARAR LANTQGKKAK 180 RKARERQLEE SRRLAVLQKR RELKNAGINI KVTTKKKGQM DYNADIPFEK APAAGFYDTQ 240 DELARNEYQR EMFDPRKQQL ANKRKGDAQE DDGQSTKRRK NERDGGAAAF AAAAKAGQLQ 300 RIREAEQSSK RRSLTLPAPQ VSENELEDIV KMGMSGERAS QSADMSENYG TRGLIGTYTN 360 TVGATPIRTP RAPQEEDRIS NELRDARART ATQSALLGGE NTPMADESST TGYGGVAPSK 420 QAIFTPNPLA TPMRGASHAG TSATPLRTPR DSFKLNADDG SVQLLQQTPL DIRLREQTMR 480 SDIRSKLASL PKPKEVEWEL ELPEEQRELD AGSDRHERED AAVRDQRNAD LAHAAAVANF 540 KRQTSVVQKG LPRPKVADPD ALLKSYRVSD DPVSHSVAEE AALLMLHDSI NPDGGKGTQG 600 LRPLQAFADD ALQAAQMEVI SEMGQNDQRT VFGEAFNREW DTAHSNTILP GLAGYAEDEI 660 DEHQLLTEAF DTLQESMSNS AEKSKTLEKK LVKVHGGYME RQKKLKAKIL EAAGILETTK 720 LDSETTRFKI AAEEAGMSER LEQGREEVAF VAKREREAQE LYRERMMELE SL

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MPVVKGGVWT NIEDEILKAA VSKYGLNQWA RVASLLARKT AKQCKARWAE WLDPGIRKIE  60
WSREEDEKLL HLAKLMPTQW RTIAPIVGRT ATQCLERYQK LLDEAEAREN AGELGLGGPE  120
GGETSAPSAD DVRRLRPGEL DPDPESKPAR PDTIDLDEDE KEMLSEARAR LANTQGKKAK  180
RKARERQLEE SRRLAVLQKR RELKNAGINI KVTTKKKGQM DYNADIPFEK APAAGFYDTQ  240
DELARNEYQR EMFDPRKQQL ANKRKGDAQE DDGQSTKRRK NERDGGAAAF AAAAKAGQLQ  300
RIREAEQSSK RRSLTLPAPQ VSENELEDIV KMGMSGERAS QSADMSENYG TRGLIGTYTN  360
TVGATPIRTP RAPQEEDRIS NELRDARART ATQSALLGGE NTPMADESST TGYGGVAPSK  420
QAIFTPNPLA TPMRGASHAG TSATPLRTPR DSFKLNADDG SVQLLQQTPL DIRLREQTMR  480
SDIRSKLASL PKPKEVEWEL ELPEEQRELD AGSDRHERED AAVRDQRNAD LAHAAAVANF  540
KRQTSVVQKG LPRPKVADPD ALLKSYRVSD DPVSHSVAEE AALLMLHDSI NPDGGKGTQG  600
LRPLQAFADD ALQAAQMEVI SEMGQNDQRT VFGEAFNREW DTAHSNTILP GLAGYAEDEI  660
DEHQLLTEAF DTLQESMSNS AEKSKTLEKK LVKVHGGYME RQKKLKAKIL EAAGILETTK  720
LDSETTRFKI AAEEAGMSER LEQGREEVAF VAKREREAQE LYRERMMELE SL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	280	KRKGDAQEDDGQSTKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	1e-129	MYB family protein