PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023881584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 216aa MW: 24597.8 Da PI: 8.3176 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.5e-19 | 40 | 91 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f++eq++ Le+ Fe++ + +++ +LA++lgL+ rq+ +WFqNrRa++k XP_023881584.1 40 SRFSAEQIKSLESSFESETRLEPRKKVQLARELGLQPRQIAIWFQNRRARWK 91 67*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 123.1 | 1.3e-39 | 38 | 128 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +k r+s+eq+k+LE+sFe+e++Lep++Kv+lareLglqprq+a+WFqnrRAR+k+kq+E++y+ Lk++yd+l+++ e+L+ke ++L +l+ XP_023881584.1 38 NKSRFSAEQIKSLESSFESETRLEPRKKVQLARELGLQPRQIAIWFQNRRARWKSKQIENEYKILKDNYDNLASQFESLKKERQSLLIQLQ 128 699***********************************************************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MEGREYMYSP AVPEGNYEIF TCQQPPQTAR KKKNKIVNKS RFSAEQIKSL ESSFESETRL 60 EPRKKVQLAR ELGLQPRQIA IWFQNRRARW KSKQIENEYK ILKDNYDNLA SQFESLKKER 120 QSLLIQLQIL GDLLEKTHGG NEHSKGLEGN SAVCTSNNVN TNSETKAKLN CFQEGMEGSA 180 VMCPHEDKTG VGNLEEGQGL LNVTEHVHVP FASLEK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 94 | RRARWKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 6e-47 | HD-ZIP family protein |