PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881584.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HD-ZIP
Protein Properties Length: 216aa    MW: 24597.8 Da    PI: 8.3176
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.84.5e-194091556
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                     +f++eq++ Le+ Fe++  +  +++ +LA++lgL+ rq+ +WFqNrRa++k
  XP_023881584.1 40 SRFSAEQIKSLESSFESETRLEPRKKVQLARELGLQPRQIAIWFQNRRARWK 91
                    67*************************************************9 PP

2HD-ZIP_I/II123.11.3e-3938128292
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     +k r+s+eq+k+LE+sFe+e++Lep++Kv+lareLglqprq+a+WFqnrRAR+k+kq+E++y+ Lk++yd+l+++ e+L+ke ++L  +l+
  XP_023881584.1  38 NKSRFSAEQIKSLESSFESETRLEPRKKVQLARELGLQPRQIAIWFQNRRARWKSKQIENEYKILKDNYDNLASQFESLKKERQSLLIQLQ 128
                     699***********************************************************************************98876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEGREYMYSP AVPEGNYEIF TCQQPPQTAR KKKNKIVNKS RFSAEQIKSL ESSFESETRL  60
EPRKKVQLAR ELGLQPRQIA IWFQNRRARW KSKQIENEYK ILKDNYDNLA SQFESLKKER  120
QSLLIQLQIL GDLLEKTHGG NEHSKGLEGN SAVCTSNNVN TNSETKAKLN CFQEGMEGSA  180
VMCPHEDKTG VGNLEEGQGL LNVTEHVHVP FASLEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18694RRARWKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.16e-47HD-ZIP family protein