PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881390.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 221aa    MW: 23912.9 Da    PI: 5.8467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.2e-1369113655
             AP2   6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++++g+Wv+eIr p+    + +r++lg++ t ++Aa a++ a+++l+g
  XP_023881390.1  69 A--RSRSGKWVSEIRQPR----KaTRIWLGTYPTRDMAATAYDVAALALKG 113
                     5..5789*********84....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MCVLICLFLT ANVRREEETL NSNTTATIST STSTITTATS PISVSEGFSG EPGSSSSSTT  60
AKQKKFRGAR SRSGKWVSEI RQPRKATRIW LGTYPTRDMA ATAYDVAALA LKGPDTVLNF  120
PDQILWYPIP LSMSPVDIRA AAASAAEKMM KRSSGSSHEA THLRSTEEGY FIDEEELLNM  180
PSLLVNMAEG MLLTPPRIQS KSSSDEPGGD GNGDGLWSYS Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-39ERF family protein