PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023881389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 24588.4 Da PI: 9.2634 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 40.6 | 6.5e-13 | 74 | 118 | 6 | 55 |
AP2 6 VrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++g+Wv+eIr p+ + +r++lg++ t ++Aa a++ a+++l+g XP_023881389.1 74 A--RSRSGKWVSEIRQPR----KaTRIWLGTYPTRDMAATAYDVAALALKG 118 5..5789*********84....36************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MAKNPNVRRN NPYRTANVRR EEETLNSNTT ATISTSTSTI TTATSPISVS EGFSGEPGSS 60 SSSTTAKQKK FRGARSRSGK WVSEIRQPRK ATRIWLGTYP TRDMAATAYD VAALALKGPD 120 TVLNFPDQIL WYPIPLSMSP VDIRAAAASA AEKMMKRSSG SSHEATHLRS TEEGYFIDEE 180 ELLNMPSLLV NMAEGMLLTP PRIQSKSSSD EPGGDGNGDG LWSYSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-38 | ERF family protein |