PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023881185.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 355aa    MW: 38877.4 Da    PI: 8.4786
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023881185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.41.5e-07140160323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     Cp C+k F+rk+n+++H rtH
  XP_023881185.1 140 CPECNKAFTRKDNMEQHRRTH 160
                     ********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDDLNHASLY PPIPDATGAI PASAYPMPMP MVQMSNLQHM QTIPPSHAHM QPAQQQQQLS  60
QQHQQPPPPP PEQSRASTSP ASEPARITVQ AGLSSAKLQS KKNQYPCPMA KQFGCTDYFT  120
TSGHAARHAK KHTGKKDAFC PECNKAFTRK DNMEQHRRTH QNGRGASRSA GTASCDDSKV  180
KKSTKQTSKK TNGKVEPQLE AAVEQQLAEQ QQEQQEQQKQ QQQQQQQQQQ QQHLLDQSMM  240
MPPTCGPYFI GGNGMDTIPV APLPMAMPDL SGRPQLQRSS YGMNSLDYVA PAAPMTISED  300
SLHYSYPSPG LSNGLNSLAL AASEHQRLSQ EKASSHSPSC ERMRGSPSSS SDQTP