PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880982.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 565aa MW: 60214 Da PI: 6.6806

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.8	2.5e-34	279	335	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgsefprsYY+Ct++gCpvkkkvers d++v+ei+Y+g+Hnh+ XP_023880982.1 279 DDGYNWRKYGQKQVKGSEFPRSYYKCTFSGCPVKKKVERSL-DGQVTEIIYKGQHNHQ 335 8**************************************.*************8 PP
2	WRKY	106.1	1.8e-33	451	509	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++dpk+v++tYeg+Hnh+ XP_023880982.1 451 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTVGCNVRKHVERASSDPKAVITTYEGKHNHD 509 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MGEREAEPPL PSTTSFSSSS SSSTSLPLKL TASSSSSSSS LRPTITLPPR TSIETLFNGG 60 GGGGGNSSGS GLGLSGLGFS PGPMTLVSSF FNDNDDCKSF SQLLAGAMTS PATQRPSLPP 120 PTAVEDVGGG GSGGKDDDKS FSGGGGEEEF RFQQNRPTGL AISPSSIFTV PPGLSPAGFL 180 DSPGQGPFGM THQQALAQVT AQAAQAHTHV HIQADYSSSL SAAPATSLTQ LPAFTTNTTA 240 HQQVPPSIPD SGVANQSSDF SHFDQRSQPS TFAVDKPADD GYNWRKYGQK QVKGSEFPRS 300 YYKCTFSGCP VKKKVERSLD GQVTEIIYKG QHNHQPPQKR AKDTGNSNQG NPDFASQVQS 360 GNLNKLKEGT GLYLMSKKDQ ESSQATPEHL SGTSDSEEVG DAETGVDEKD EDEPEAKRQS 420 TEVRVSEAAS SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY GQKVVKGNPY PRSYYKCTTV 480 GCNVRKHVER ASSDPKAVIT TYEGKHNHDI PAAKTSSHNT ANSIASQSKP DKVLPEKHSL 540 INNMGLGNNE QQPIARLRLK EEQIT

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MGEREAEPPL PSTTSFSSSS SSSTSLPLKL TASSSSSSSS LRPTITLPPR TSIETLFNGG  60
GGGGGNSSGS GLGLSGLGFS PGPMTLVSSF FNDNDDCKSF SQLLAGAMTS PATQRPSLPP  120
PTAVEDVGGG GSGGKDDDKS FSGGGGEEEF RFQQNRPTGL AISPSSIFTV PPGLSPAGFL  180
DSPGQGPFGM THQQALAQVT AQAAQAHTHV HIQADYSSSL SAAPATSLTQ LPAFTTNTTA  240
HQQVPPSIPD SGVANQSSDF SHFDQRSQPS TFAVDKPADD GYNWRKYGQK QVKGSEFPRS  300
YYKCTFSGCP VKKKVERSLD GQVTEIIYKG QHNHQPPQKR AKDTGNSNQG NPDFASQVQS  360
GNLNKLKEGT GLYLMSKKDQ ESSQATPEHL SGTSDSEEVG DAETGVDEKD EDEPEAKRQS  420
TEVRVSEAAS SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY GQKVVKGNPY PRSYYKCTTV  480
GCNVRKHVER ASSDPKAVIT TYEGKHNHDI PAAKTSSHNT ANSIASQSKP DKVLPEKHSL  540
INNMGLGNNE QQPIARLRLK EEQIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-151	WRKY family protein