PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023880884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 245aa MW: 27864.8 Da PI: 4.6754 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 37 | 91 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le++Fe+++ + +++ eLA++lgL+ rqV +WFqN+Ra++k XP_023880884.1 37 KNKRRFSDEQIKSLETMFESESRLEPKKKLELARELGLQPRQVAIWFQNKRARWK 91 67889*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 121.2 | 5.3e-39 | 38 | 129 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+k+LE++Fe+e++Lep++K elareLglqprqva+WFqn+RAR+k+k+lE+dy+ L+ +y++l++ e+L+ke+++L +l++ XP_023880884.1 38 NKRRFSDEQIKSLETMFESESRLEPKKKLELARELGLQPRQVAIWFQNKRARWKSKNLERDYSILRGNYNNLASTFEALKKEKHALVVQLQK 129 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MLDHSEYSSS AAAGAAAESF GCMDMDSLTT SRKKKNKNKR RFSDEQIKSL ETMFESESRL 60 EPKKKLELAR ELGLQPRQVA IWFQNKRARW KSKNLERDYS ILRGNYNNLA STFEALKKEK 120 HALVVQLQKL NDLMQRPQEE RQCCSEGLAA NSIQGELDNG DTTKCESETK PSLSTERSEH 180 GASVLSDEDS NIKAEYFTLE DEPSLLNMVE PADGSLTSPE DWSSLNSDGL FDESNSNNQW 240 WDFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-67 | HD-ZIP family protein |