PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023880884.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HD-ZIP
Protein Properties Length: 245aa    MW: 27864.8 Da    PI: 4.6754
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023880884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.61.2e-193791256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++++f++eq++ Le++Fe+++ +  +++ eLA++lgL+ rqV +WFqN+Ra++k
  XP_023880884.1 37 KNKRRFSDEQIKSLETMFESESRLEPKKKLELARELGLQPRQVAIWFQNKRARWK 91
                    67889*************************************************9 PP

2HD-ZIP_I/II121.25.3e-3938129293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+eq+k+LE++Fe+e++Lep++K elareLglqprqva+WFqn+RAR+k+k+lE+dy+ L+ +y++l++  e+L+ke+++L  +l++
  XP_023880884.1  38 NKRRFSDEQIKSLETMFESESRLEPKKKLELARELGLQPRQVAIWFQNKRARWKSKNLERDYSILRGNYNNLASTFEALKKEKHALVVQLQK 129
                     79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MLDHSEYSSS AAAGAAAESF GCMDMDSLTT SRKKKNKNKR RFSDEQIKSL ETMFESESRL  60
EPKKKLELAR ELGLQPRQVA IWFQNKRARW KSKNLERDYS ILRGNYNNLA STFEALKKEK  120
HALVVQLQKL NDLMQRPQEE RQCCSEGLAA NSIQGELDNG DTTKCESETK PSLSTERSEH  180
GASVLSDEDS NIKAEYFTLE DEPSLLNMVE PADGSLTSPE DWSSLNSDGL FDESNSNNQW  240
WDFWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.11e-67HD-ZIP family protein