PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880395.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 689aa MW: 74849.7 Da PI: 8.7348

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	139	156	6	23
TTEEESSHHHHHHHHHHT CS zf-C2H2 6 CgksFsrksnLkrHirtH 23 C F+r+++L rHir+H XP_023880395.1 139 CQLNFTRSEHLARHIRKH 156 999**************9 PP
2	zf-C2H2	12.5	0.00044	165	184	5	23
TTTEEESSHHHHHHHHHH.T CS zf-C2H2 5 dCgksFsrksnLkrHirt.H 23 +C+++Fsr +nL++H +t H XP_023880395.1 165 HCSRRFSRLDNLRQHAQTvH 184 7**************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MQTTFDAQQT VEGLTPTTPR PTRAEPMIQG EKAEVTTPST PTGNSFGGVS GQRPLPDEPF 60 TPQQEQKPAH EAEGSAKRDA SRRATASPPA QDVEMGEPDE DDGAGEDDAS DNDSVTSDSQ 120 RPSKKKKGQR FYCTEYPPCQ LNFTRSEHLA RHIRKHTGER PFQCHCSRRF SRLDNLRQHA 180 QTVHVNEDIP GDSLAATSTR FQRQIRTERV RPPTARSRAS TIGSQGAHSR GHSRTLSASS 240 VGSTTSSVGG PEDVRRRPPP LAMATDSPAR ARLSLNTFDA SGNGGNPQQY GYYPQSPSGY 300 STPTSTTFST GPGSPSGMAS PSSTISRSSY YTGSRHARRL SVPSGPQSFQ FPMAPFYSTS 360 KFDPIPSGSS VTFSPGGGSS LVSSPTSSVF HSRRDSETEL EYRRRTWHPG TNNNYSQRPA 420 TSGLMYHQTV DDQRPATSTQ PAATQMTSNQ VKLPGIESFD HAPPTPARGS PMMVDAQLSN 480 VGRPSDGGLH HNLTRLDITT ANAPVENQWQ ALRPSGPAQH SHYVQQHTSA PGQYISHPTP 540 EQPVTPRKNK RQGFYGGPPQ PPAQSYLLPR TSPEDSGSSD GVPTPSTQGA EYNPVIVHHN 600 GTQDMLPPPT VLTEERKVYY ASSFNKPEPA RADSGFQPYA QPSQPMYALQ SGHDPRFPTN 660 YDPPQNNDMS KLEALVAVAT REGHAHHRQ

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MQTTFDAQQT VEGLTPTTPR PTRAEPMIQG EKAEVTTPST PTGNSFGGVS GQRPLPDEPF  60
TPQQEQKPAH EAEGSAKRDA SRRATASPPA QDVEMGEPDE DDGAGEDDAS DNDSVTSDSQ  120
RPSKKKKGQR FYCTEYPPCQ LNFTRSEHLA RHIRKHTGER PFQCHCSRRF SRLDNLRQHA  180
QTVHVNEDIP GDSLAATSTR FQRQIRTERV RPPTARSRAS TIGSQGAHSR GHSRTLSASS  240
VGSTTSSVGG PEDVRRRPPP LAMATDSPAR ARLSLNTFDA SGNGGNPQQY GYYPQSPSGY  300
STPTSTTFST GPGSPSGMAS PSSTISRSSY YTGSRHARRL SVPSGPQSFQ FPMAPFYSTS  360
KFDPIPSGSS VTFSPGGGSS LVSSPTSSVF HSRRDSETEL EYRRRTWHPG TNNNYSQRPA  420
TSGLMYHQTV DDQRPATSTQ PAATQMTSNQ VKLPGIESFD HAPPTPARGS PMMVDAQLSN  480
VGRPSDGGLH HNLTRLDITT ANAPVENQWQ ALRPSGPAQH SHYVQQHTSA PGQYISHPTP  540
EQPVTPRKNK RQGFYGGPPQ PPAQSYLLPR TSPEDSGSSD GVPTPSTQGA EYNPVIVHHN  600
GTQDMLPPPT VLTEERKVYY ASSFNKPEPA RADSGFQPYA QPSQPMYALQ SGHDPRFPTN  660
YDPPQNNDMS KLEALVAVAT REGHAHHRQ