PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023880098.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 364aa    MW: 40741.5 Da    PI: 6.0591
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023880098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.54.6e-2386170290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                      Yn+YA ++GFsvrk+k ++   ++ + +r++vCskeg+++++++  ++++ ++ +trtgC+a+++ + + +g+w+vt+++  HnHela
  XP_023880098.1  86 LYNDYAIRIGFSVRKEKIRYA--KNFVRQRDYVCSKEGFPRDSDNL-DDKKFKKLQTRTGCEASIRFTVT-NGEWKVTHFNPTHNHELA 170
                     7****************9998..5668***************9998.99999*****************9.****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MWVLIGASGL ERRCGACDGC GVDGVLVMVL LVSLFSLMTE VVVEIQCSPP QLTMADQDIR  60
VNEEGVEDIE TLLGMVVHSE DEAYKLYNDY AIRIGFSVRK EKIRYAKNFV RQRDYVCSKE  120
GFPRDSDNLD DKKFKKLQTR TGCEASIRFT VTNGEWKVTH FNPTHNHELA KPEERPFLRS  180
NRKITDAQLG VIKTFKEAGI RTISAYSYLV EAGGFENVGF IKRDCYNVVN KQKLINVEAG  240
DAQSLPQPNT FISNSATHES TRIPNAPTPY GFDHAILAYG FGYAPSIDDY KLVKAVNAPL  300
VVVFSLKTSA WKLVEGFHYE KPTEVWEGPL PCGTHLNGAL HWVFKICGGG ECVIATFDLE  360
TDMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-22FAR1 family protein