PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023880094.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 424aa    MW: 46598.4 Da    PI: 7.5933
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023880094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.7e-1777126255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  XP_023880094.1  77 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 126
                     59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MEEAFRRLNG LTHKSESITD HQNHHNPKKC TTIISTTTTP PTTTSSTATT TTNTTTNTNN  60
KRTIRETNST GGGTTMRYRG VRRRPWGRYA AEIRDPQSKE RRWLGTFDTA EEAACAYDCA  120
ARAMRGLKAR TNFVYPTSPT HQSATDHLLP PFNFAKHSQP SGKTPPNHHR QFGPTWSSPY  180
GDFSGSLPQR NGSLNMLLLC DLLSSSSSSS NPSSLVSSVD QFPYFNGSSS SLVHPSANSN  240
ISDTFTNSSS MSFPVIDNNQ SYNTGYNTGG ANRAIPTQSL GDSSEFFPKE PSDSGLLEEV  300
IHGFFPKPLS KKCDPPKTQT CTNLETSPPL ISDMSVAQSF EGMRRGIKND HFGCSFDYQG  360
VPLLPQQFEN FNGFKNEAFS SQAAMPFGYE MPAVNLQVGP ESMLDDIFQY PELLNAFAAR  420
VQNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-14ERF family protein