PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880040.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 2075aa MW: 227763 Da PI: 10.4017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4e-09	1034	1074	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T E +++v a+k+ +++ W Ia+ ++ gRt +c+++++ XP_023880040.1 1034 TFTDNERQIFVAAFKETPKK-WGEIASLLP-GRTYRDCIHHYY 1074 699***************.*****.*********8 PP
2	Myb_DNA-binding	27.7	6.4e-09	1288	1329	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W+ E+ ++++++ +G++ +++Ia++mg ++t ++k+++q XP_023880040.1 1288 YWSVPEQTDFAKYIAHFGTD-FASIAAHMG-TKTQTMIKNHYQR 1329 59999*************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 2075 aa Download sequence
MSSRYPPSDY RPPRDRSRSP PRFDRRASSA NVFENRPPPP PRITSDAPRG PRSQFDASRA 60 PPGAGPSPTT PASRPAFSSL RDAPPLGSSD RARPFRERDD YRRDRPPSPR ERSPARPFKN 120 SRDYPPRDID VGRPRRGSRD GPLSAGATYP DSSSFAPGSF GGRGGFNGRG RGRVEFEAGR 180 GRGVRRNLDD RDLFRRDRSP PPRWGRDLSR DGREPERRDD RRFERRDDDR RPEWAERDRE 240 TTDRGRRDQP PLRPEPRQLN GSPHSATGSH AGSQAPPIDP GRLALIEGSS ADVAARRQSV 300 PQNAAPPPRR EVPETPSYLN GRADATANRY NQRGSSPPTQ APPVPAFTLS FAPTGPAAAS 360 STSNTSSSKP PRPKSAGPSD DVPVHEHTRV EKRVEPPVDA PVAPKAQARA PLAPKAQLAE 420 PPPSAPRAPR ALEVEPAPGP HGRLQGVRSM ESLAGSRAPP SGPSFPRASM PPRSSSTAQA 480 VAVSTSSLAT LTQPVSPNVQ QVREFSAPTG PRATRISPAP ASVSPRPAFA SPRSEAASFQ 540 RNQTPPPPSG PRRRSISVSP KVPASSVPTA PKADRIPPTA PRGGPMTSAR ATDRPGGPQS 600 WAVPSAPRNL QWNQWKRPLP PESKLVPAKR DSAGEEKDRQ VEVMSSDVTM SEASPKMQHD 660 SRQAQIQDEN KMQIDSDTNP PAHSAKQSFF GQPMETTEPD EVSDAADVED IMSSSEDEGL 720 DVEDEALFNA KFEKRKRELE AKLVDLSARE YRATTPLECI ARLARISIAD LQRANENQEM 780 DVDETNVAKG HRRKKPPTQN SDSDANPDAI TPTQEEDDTR VQIRDGGDDG PEHIRYVRRP 840 SPEIINLPYL TKTPQPLFKS EPLVASSLDE VTMQAAVYDA LRDDMGAISS AQADCEQDFL 900 EKLRTWRAQC AKLDREQEEH EKVERQKSME PLPEMDAPLA SINNAGSESR RLHKFSSEYI 960 IEQVLKQSEE TARMEQEKLD RKAKKVQADM EKEALLPDLL SVKEVRSGVY IDSNRYRDPD 1020 SLPMVFSYLP PDDTFTDNER QIFVAAFKET PKKWGEIASL LPGRTYRDCI HHYYANKWDN 1080 RFKDRTKGKA RGGPGRGRGR GGKSALRGRG AAAMADLNRN EPVAPPSVSD SGRPKRAAAP 1140 TTFGERETDL KTTPAGPSPV KKLGLAAKSD GTGEPEKKKR KGEKPGRKPK SQQPLAALAA 1200 APITSPSKSY LPTMQSKEEI VRAQNLADAN LLAGLHSGHH HPMMVPAEGQ LSYAVHDTFA 1260 QPPLPIEEAA RSKPIGPGAL SKSNASSYWS VPEQTDFAKY IAHFGTDFAS IAAHMGTKTQ 1320 TMIKNHYQRQ VESGNKAELE ASAKDADHRR KNGEDMGAPP TPTPIVKRKY ENPQSNAPRT 1380 LAPHKNATAM EIDETPPQSR IIPSKHTSPP QFVQQPRFTT TAQSAPVTAP SPLPTAAVLQ 1440 HTPHAQPITS ARPMQHSLSS RISFLSDTMP DARTTLQQTG QPLRMLSEAN NEAVVPTPLP 1500 ARSQPSLEMM RDLKAEQDRA FRVQQEQSQQ ERIGLHRQMP MHHETMQLSP ATQPRIAPPL 1560 ERQGSTEESA SSASSRAAFA GSGLASLSRP QSSQPIFGLG SMGLGSSLSN RSPFRQAQIK 1620 REDSRPSSVP AVPLPTIAPP VPAPEPPKRS NLMSILNSEP EAAAPPPKRE TPSVAPLRTH 1680 SPAPRLTAFS QSSTPAPLLD HSSRRDTRLQ SPMAQHAFAA RPPFQHSGDK AASHHSQPPP 1740 LNHELSSGGL PNPQPSKPDW ASHVHQRPSQ SGQSARPPLD GGDLRSSIFS HRSSALSPLH 1800 QPMRGNPSPP PNAMLGHSRT SSLNAQSSQA PRDSQRPGLA IQQPQHQAHS SAQPMQPGSY 1860 GSQSGGPFHQ HPPEMRNHAQ QSHNGAITAG FALPGGHHRG VSRDDLMRHE QAFAQRDREE 1920 HEWRRRQQED AERRESQFRH DQERQQHQQH QQQQSQQQSQ QAFGRSLPPA MQPSFEAPAP 1980 FGQNRPSFGL RETSLREVQS MVAEQTYIEE ANRRRLERIM MEREQEAAAD YRRRHDEPGF 2040 RRTPLGGGNG YGGPPPPPPQ QQQQQQPGPP PPSRR

Sequence ? help Back to Top

Protein Sequence Length: 2075 aa Download sequence

MSSRYPPSDY RPPRDRSRSP PRFDRRASSA NVFENRPPPP PRITSDAPRG PRSQFDASRA  60
PPGAGPSPTT PASRPAFSSL RDAPPLGSSD RARPFRERDD YRRDRPPSPR ERSPARPFKN  120
SRDYPPRDID VGRPRRGSRD GPLSAGATYP DSSSFAPGSF GGRGGFNGRG RGRVEFEAGR  180
GRGVRRNLDD RDLFRRDRSP PPRWGRDLSR DGREPERRDD RRFERRDDDR RPEWAERDRE  240
TTDRGRRDQP PLRPEPRQLN GSPHSATGSH AGSQAPPIDP GRLALIEGSS ADVAARRQSV  300
PQNAAPPPRR EVPETPSYLN GRADATANRY NQRGSSPPTQ APPVPAFTLS FAPTGPAAAS  360
STSNTSSSKP PRPKSAGPSD DVPVHEHTRV EKRVEPPVDA PVAPKAQARA PLAPKAQLAE  420
PPPSAPRAPR ALEVEPAPGP HGRLQGVRSM ESLAGSRAPP SGPSFPRASM PPRSSSTAQA  480
VAVSTSSLAT LTQPVSPNVQ QVREFSAPTG PRATRISPAP ASVSPRPAFA SPRSEAASFQ  540
RNQTPPPPSG PRRRSISVSP KVPASSVPTA PKADRIPPTA PRGGPMTSAR ATDRPGGPQS  600
WAVPSAPRNL QWNQWKRPLP PESKLVPAKR DSAGEEKDRQ VEVMSSDVTM SEASPKMQHD  660
SRQAQIQDEN KMQIDSDTNP PAHSAKQSFF GQPMETTEPD EVSDAADVED IMSSSEDEGL  720
DVEDEALFNA KFEKRKRELE AKLVDLSARE YRATTPLECI ARLARISIAD LQRANENQEM  780
DVDETNVAKG HRRKKPPTQN SDSDANPDAI TPTQEEDDTR VQIRDGGDDG PEHIRYVRRP  840
SPEIINLPYL TKTPQPLFKS EPLVASSLDE VTMQAAVYDA LRDDMGAISS AQADCEQDFL  900
EKLRTWRAQC AKLDREQEEH EKVERQKSME PLPEMDAPLA SINNAGSESR RLHKFSSEYI  960
IEQVLKQSEE TARMEQEKLD RKAKKVQADM EKEALLPDLL SVKEVRSGVY IDSNRYRDPD  1020
SLPMVFSYLP PDDTFTDNER QIFVAAFKET PKKWGEIASL LPGRTYRDCI HHYYANKWDN  1080
RFKDRTKGKA RGGPGRGRGR GGKSALRGRG AAAMADLNRN EPVAPPSVSD SGRPKRAAAP  1140
TTFGERETDL KTTPAGPSPV KKLGLAAKSD GTGEPEKKKR KGEKPGRKPK SQQPLAALAA  1200
APITSPSKSY LPTMQSKEEI VRAQNLADAN LLAGLHSGHH HPMMVPAEGQ LSYAVHDTFA  1260
QPPLPIEEAA RSKPIGPGAL SKSNASSYWS VPEQTDFAKY IAHFGTDFAS IAAHMGTKTQ  1320
TMIKNHYQRQ VESGNKAELE ASAKDADHRR KNGEDMGAPP TPTPIVKRKY ENPQSNAPRT  1380
LAPHKNATAM EIDETPPQSR IIPSKHTSPP QFVQQPRFTT TAQSAPVTAP SPLPTAAVLQ  1440
HTPHAQPITS ARPMQHSLSS RISFLSDTMP DARTTLQQTG QPLRMLSEAN NEAVVPTPLP  1500
ARSQPSLEMM RDLKAEQDRA FRVQQEQSQQ ERIGLHRQMP MHHETMQLSP ATQPRIAPPL  1560
ERQGSTEESA SSASSRAAFA GSGLASLSRP QSSQPIFGLG SMGLGSSLSN RSPFRQAQIK  1620
REDSRPSSVP AVPLPTIAPP VPAPEPPKRS NLMSILNSEP EAAAPPPKRE TPSVAPLRTH  1680
SPAPRLTAFS QSSTPAPLLD HSSRRDTRLQ SPMAQHAFAA RPPFQHSGDK AASHHSQPPP  1740
LNHELSSGGL PNPQPSKPDW ASHVHQRPSQ SGQSARPPLD GGDLRSSIFS HRSSALSPLH  1800
QPMRGNPSPP PNAMLGHSRT SSLNAQSSQA PRDSQRPGLA IQQPQHQAHS SAQPMQPGSY  1860
GSQSGGPFHQ HPPEMRNHAQ QSHNGAITAG FALPGGHHRG VSRDDLMRHE QAFAQRDREE  1920
HEWRRRQQED AERRESQFRH DQERQQHQQH QQQQSQQQSQ QAFGRSLPPA MQPSFEAPAP  1980
FGQNRPSFGL RETSLREVQS MVAEQTYIEE ANRRRLERIM MEREQEAAAD YRRRHDEPGF  2040
RRTPLGGGNG YGGPPPPPPQ QQQQQQPGPP PPSRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1091	1101	RGGPGRGRGRG
2	1161	1181	KKLGLAAKSDGTGEPEKKKRK