PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023879963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 152aa MW: 17369.7 Da PI: 6.2564 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.2 | 7.8e-24 | 24 | 91 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ae ++wyf+s+r +nr+t +gyWka g++++v++++++ vg+kk+Lvfy+g+ap+g kt+W+m+eyrl XP_023879963.1 24 AEGNKWYFYSRRT--------QNRVTCNGYWKAMGNEEPVMNSSSKSVGMKKILVFYTGEAPSGIKTNWIMQEYRL 91 46789****9984........589**************************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 152 aa Download sequence |
MSFPISIFIH MIHGTLMFVG KALAEGNKWY FYSRRTQNRV TCNGYWKAMG NEEPVMNSSS 60 KSVGMKKILV FYTGEAPSGI KTNWIMQEYR LSDSAGSTSR SSKRRGHPKI DYSTWVICRV 120 YERDDDDDGT ELSCLDEVFL SLDDLDEISL PI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64530.1 | 3e-50 | NAC family protein |